Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_M21
(899 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 47 2e-05
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 36 0.030
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 36 0.030
U80840-9|AAB37924.1| 289|Caenorhabditis elegans Hypothetical pr... 36 0.039
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 35 0.091
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132943-9|CAB81982.1| 233|Caenorhabditis elegans Hypothetical ... 29 4.5
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Frame = +3
Query: 153 STPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCG 332
+T A+ NV +G+Y NC ++ C ++ +M CP GL ++ S+++ C
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKY----CT 525
Query: 333 YPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNAS--------------PTNCGQYRTCV 470
C + P TT P + P + P++C ++ CV
Sbjct: 526 TSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCV 585
Query: 471 GGRAFDMVCPPGTSIQS 521
G +++ CP G S +
Sbjct: 586 NGISYNFECPNGLSFHA 602
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 135 AASHVQSTPAAATAQNVICKA-RNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 299
+A V +T A T K ++G++ ++C +I C + + N CP+GL F+
Sbjct: 546 SAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFH 601
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 423 HPNASPTNCGQYRTCVGGRAFDMVCPPGTSIQSRLQ 530
+PN++ NCG + C+ +++ M CP G + L+
Sbjct: 489 YPNSN--NCGLFVLCLSSKSYSMSCPSGLQYSASLK 522
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 42.3 bits (95), Expect = 5e-04
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +3
Query: 177 QNVICKAR-NGYYKTDANCDTYIECRDYQA-TNMICPDGLHFNPSVEWPAYPCGYPVEVT 350
Q+ C + +G Y+ + +C ++C + + C L FN C YP +V+
Sbjct: 1178 QSAFCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTG----KCDYPQKVS 1233
Query: 351 CVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGT 509
G QT +C ++G F A NC + CV GR M CP GT
Sbjct: 1234 ----GCENHGQTNGECS-EHGSFI---ADANNCEVFYRCVWGRKVVMTCPSGT 1278
Score = 33.5 bits (73), Expect = 0.21
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Frame = +3
Query: 108 SYIYLALLVAASHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDG 287
SY +++ V ST AA A +G + + YI+C + A C +
Sbjct: 667 SYESYTTQYSSNDVPSTSAAPIGDRCSLDA-SGLFSLGCS-QKYIQCSNGAAIVRRCGES 724
Query: 288 LHFNPSVEWPAYPCGYPVEV-TCVGRGSI-QPAQTTP---DCPHQYGIFKH--PNASPTN 446
L+FN + + C Y EV C +GS P TTP + YGI P+ + T
Sbjct: 725 LYFNEATQ----ECTYRDEVPECGSQGSTSSPVITTPGQDQSSNYYGIPSDDVPSTTQTP 780
Query: 447 CGQYRTCVGGRAFDMVC 497
G V FD+ C
Sbjct: 781 VGDRCAYVASGLFDLGC 797
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 195 ARNGYYKTDAN-CDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGS 368
+ +G + DAN C+ + C + M CP G FNP + +P P +C G+ S
Sbjct: 1246 SEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVP---SCSGQAS 1301
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 514 FNPDFSRCDWADLVPSCDAE 573
FNP S CDW VPSC +
Sbjct: 1280 FNPLLSVCDWPSAVPSCSGQ 1299
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.030
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = +3
Query: 189 CKARNGYYKTDANCDT-YIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVT-CVGR 362
C+ + + C T ++ C A M CP L FNP++ C +P +V C G
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGL 302
Query: 363 GSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPG 506
+ QP C G F S + + C GRA M CP G
Sbjct: 303 PTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPAG 340
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.030
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = +3
Query: 189 CKARNGYYKTDANCDT-YIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVT-CVGR 362
C+ + + C T ++ C A M CP L FNP++ C +P +V C G
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTI----LVCDWPRDVAECAGL 302
Query: 363 GSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPG 506
+ QP C G F S + + C GRA M CP G
Sbjct: 303 PTPQPT-----CEED-GYFSFGQCSSS----FTACTNGRAIVMFCPAG 340
>U80840-9|AAB37924.1| 289|Caenorhabditis elegans Hypothetical
protein F08D12.3a protein.
Length = 289
Score = 35.9 bits (79), Expect = 0.039
Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 8/120 (6%)
Frame = +3
Query: 180 NVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVG 359
N C+A++ Y + A C E Y T + CP+G Y G V C
Sbjct: 161 NYCCEAKDVYDPSTATCQRGYEAGPY-GTGLTCPEGTSPTTKEAVCCYFDGIQVLSACKS 219
Query: 360 R------GSIQPAQTT--PDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGTSI 515
GS P Q DC ++ + S C Q VG A D CP GTS+
Sbjct: 220 SAGPAVFGSCPPGQVVVGSDCCEAKDVY---DPSTATC-QKNEDVGPAAVDGACPAGTSL 275
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 34.7 bits (76), Expect = 0.091
Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Frame = +3
Query: 201 NGYYKTDANCDTY-IECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGSIQP 377
+GYY A C +Y C D Q M CP+ L F+ E +P P
Sbjct: 960 DGYYS--AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPP 1017
Query: 378 AQTTPDCP-HQYGIFKHPNASPTNCGQYRTCVGGRAFDMVC 497
A + C G+ SP Y C GRAF C
Sbjct: 1018 AVPSDFCTIRSNGLHHLKMCSP----HYIVCDNGRAFSGTC 1054
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 192 KARNGYYKTDANCDTYIECRDYQATNMICPDGLHFN 299
+ NG Y D D YI C +++ T CP GL ++
Sbjct: 790 RLENGNYGLDCE-DYYISCNNFETTINRCPAGLFYS 824
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 31.5 bits (68), Expect = 0.85
Identities = 26/114 (22%), Positives = 41/114 (35%)
Frame = +3
Query: 189 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGRGS 368
C++ K++ + + + C + A CP L FNP++ C +P V S
Sbjct: 179 CESDGNISKSECS-NVFFSCSEGIAHRRNCPANLVFNPAIS----SCDWPKNVMDCSEKS 233
Query: 369 IQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGTSIQSRLQ 530
+P +C G F S + C G M CP G + Q
Sbjct: 234 EKP----QNCGEVDGYFSFGRCS----SSFSACTNGIPIVMFCPDGLMFSEKNQ 279
>Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical
protein T16G12.4 protein.
Length = 213
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 211 TKQTRIVIHTLNAGTIKLLT*YARMVCTLILAW 309
TK+T V+ TL TI L++ + CTLIL W
Sbjct: 70 TKETPFVLVTLAINTIVLISAITQDFCTLILTW 102
>AL132943-9|CAB81982.1| 233|Caenorhabditis elegans Hypothetical
protein Y116F11B.13 protein.
Length = 233
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 402 HQYGIFKHPNASPTNCGQYRT---CVGGRAFDMVCPPGTSIQSRLQP 533
++Y N + NC +Y C GGR D +C PG + + + P
Sbjct: 131 NEYWAVGRKNEATRNCQRYERRSRCDGGRNEDGLCVPGLLVSTTIPP 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,488,303
Number of Sequences: 27780
Number of extensions: 411478
Number of successful extensions: 997
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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