Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_M12
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    50   3e-06
AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical...    29   3.2  
Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z79755-9|CAC42297.1|  143|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = +3

Query: 555 WVVIRKILLWVVLSGLIACLAAIIGMIITIPKECNIDLP-WYQGKVFYEVFPASFKDSXN 731
           W  +R IL  +     +   A  I +++  PK      P W+Q KV Y++  A+F DS N
Sbjct: 58  WKPVRTILFVLFWLAWVLMFAGAIAIVVLSPKCAEKQKPDWWQTKVSYQLLTATFYDSDN 117

Query: 732 DGTGDXXGLITKLDYIQNLGVAAXRLNYIFKL 827
           DG GD  G+  K+D+++ +GV       + K+
Sbjct: 118 DGVGDFAGISQKIDFLRKIGVTTVYPTPVIKI 149


>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
 Frame = +3

Query: 495 KLNGNLKINNRKLPSFVNWN-WVVIRKILLWVVLSGLI-ACLAAIIGMIITIPKECNIDL 668
           K    + ++ ++L  F N   W  IR +L   VL  LI   L A+  +++     C +  
Sbjct: 72  KNTDQIGLSEQELEQFRNDPCWKFIRTVLF--VLFWLIWLALFAVAILLVCFSPTCVLRA 129

Query: 669 P--WYQGKVFYEVFPASFKDSXNDGTGDXXGLITKLDYIQNLGV 794
              W+Q  V Y V+  SF+DS  DG GD  GLI +LD ++  GV
Sbjct: 130 KPNWWQTAVAYHVWVPSFQDSDGDGVGDVDGLINRLDQLRKSGV 173


>AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical
           protein Y116A8C.9 protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 528 KLPSFVNWNWVVIRKILLWVVLSGLIACLAAIIGMIITI 644
           KL   V+W W V+  I LWVVLS  +A +  +  +++++
Sbjct: 169 KLDKQVDWTWAVV-FIPLWVVLS--LAAVGVLYALVLSV 204


>Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical
           protein T10B10.7 protein.
          Length = 818

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 651 ECNIDLPWYQGKVFYEVFPASFKDSXNDGTG 743
           EC++D+ W  G V  + +P +  D+ N+  G
Sbjct: 338 ECDMDISWRYGPVVCKAYPLNDVDTINESDG 368


>Z79755-9|CAC42297.1|  143|Caenorhabditis elegans Hypothetical
           protein F43G9.13 protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +3

Query: 540 FVNWNWVVIRKILLWVVLSGLIACLAAIIGMIITI---PKECNIDLPW 674
           ++N  W +   I LW+ LS ++  L A I  + T+   P  C I +P+
Sbjct: 38  YMNDWWEITLSIFLWMSLSFMVISLGATILSLFTLRKHPYVCFIPIPF 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,123,137
Number of Sequences: 27780
Number of extensions: 305093
Number of successful extensions: 622
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)