Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_M12
         (859 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    58   8e-11
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    48   1e-07
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    45   8e-07
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    45   8e-07
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   2.1  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   2.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.8  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 58.4 bits (135), Expect = 8e-11
 Identities = 26/74 (35%), Positives = 45/74 (60%)
 Frame = +3

Query: 603 IACLAAIIGMIITIPKECNIDLPWYQGKVFYEVFPASFKDSXNDGTGDXXGLITKLDYIQ 782
           +ACL     ++   P +C +D  WY+  + Y+++P SF+DS  DG GD  G+  ++D+I 
Sbjct: 9   VACL-----LLAASPIDC-VDANWYKNALVYQIYPRSFQDSDGDGIGDLNGITARMDHIA 62

Query: 783 NLGVAAXRLNYIFK 824
           ++G  A  L+ I+K
Sbjct: 63  DIGADALWLSPIYK 76


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 48.0 bits (109), Expect = 1e-07
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = +3

Query: 672 WYQGKVFYEVFPASFKDSXNDGTGDXXGLITKLDYIQNLGVAAXRLNYI 818
           W++  +FY+V+P SF DS +DG GD  G+  KL +    G+ A  L+ I
Sbjct: 24  WWKNAIFYQVYPRSFMDSNSDGIGDLKGIKDKLSHFIESGITAIWLSPI 72


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 45.2 bits (102), Expect = 8e-07
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +3

Query: 687 VFYEVFPASFKDSXNDGTGDXXGLITKLDYIQNLGVAAXRLNYIF 821
           + Y+V+P SFKDS  DG GD  G+  KLD+   +GV    L+ I+
Sbjct: 31  IVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIY 75


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 45.2 bits (102), Expect = 8e-07
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = +3

Query: 687 VFYEVFPASFKDSXNDGTGDXXGLITKLDYIQNLGVAAXRLNYIF 821
           + Y+V+P SFKDS  DG GD  G+  KLD+   +GV    L+ I+
Sbjct: 31  IVYQVYPRSFKDSNGDGIGDIEGIKEKLDHFLEMGVDMFWLSPIY 75


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 495 KLNGNLKINNRKLPSFVNW 551
           K   NL  +NRKLP+  NW
Sbjct: 380 KSRTNLDPSNRKLPAPANW 398


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 650 FRNSYYHTNDSCKTSNEPRQYYPQ*NLSYNNPVPV 546
           + N+Y + N++  T+ +  QYY   N+    PVPV
Sbjct: 94  YNNNYNNYNNNYNTNYKKLQYYNIINIE-QIPVPV 127


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 465 DLIIGQAEDVKLNGNLKINNRKLPSFVNWNWVVIRKI 575
           +L I   E V L GNL INN+    F  ++  ++ K+
Sbjct: 861 ELKIVPEELVPLEGNLMINNKYALKFFPFDKHILDKL 897


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,146
Number of Sequences: 438
Number of extensions: 4074
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)