Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_M08
         (911 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1E467 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14; Fungi/M...    34   5.8  

>UniRef50_Q1E467 Cluster: Putative uncharacterized protein; n=1;
            Coccidioides immitis|Rep: Putative uncharacterized
            protein - Coccidioides immitis
          Length = 1705

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = +1

Query: 733  PXXGXKXPPXXXPXQXGGFWGGXPPXNXPPXNFFSXKXXPP 855
            P  G   PP   P    GF GG PP   PP   FS    PP
Sbjct: 987  PLPGFSGPPPPPPPPLPGFSGGPPPPPPPPLPGFSGGAPPP 1027


>UniRef50_P78621 Cluster: Cytokinesis protein sepA; n=14;
            Fungi/Metazoa group|Rep: Cytokinesis protein sepA -
            Emericella nidulans (Aspergillus nidulans)
          Length = 1790

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 28/82 (34%), Positives = 28/82 (34%)
 Frame = +1

Query: 619  GXAPXXXPFPKKXXRGFLXGKPXFLXPFKXPXXKKXFAPXXGXKXPPXXXPXQXGGFWGG 798
            G AP   P P     G L G P    P   P       P  G   PP   P   GGF G 
Sbjct: 1048 GAAPPPPPPPPPPPPGGLGGPPP---PPPPP-------PPGGFGGPPPPPPPP-GGFGGP 1096

Query: 799  XPPXNXPPXNFFSXKXXPPLXG 864
             PP   PP   F     PP  G
Sbjct: 1097 PPPPPPPPGGAFGVPPPPPPPG 1118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,445,302
Number of Sequences: 1657284
Number of extensions: 3911900
Number of successful extensions: 1911
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)