Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_M04
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription fact...    25   2.3  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    25   2.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   3.1  

>AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription factor
           proboscipedia protein.
          Length = 76

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 151 FIGDEGFALKTYLMRPFPRASATQDERKTKFNKRLCRARRV 273
           F+ + G  L   L   +      + E++  FNK LCR RR+
Sbjct: 17  FVAENG--LPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRI 55


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 199 FPRASATQDERKTKFNKRLCRARRV-VENAFGILAQKWRIFLR 324
           F     T+ E++  FNK L RARR+ + NA  +   + +I+ +
Sbjct: 60  FTNKQLTELEKEFHFNKYLTRARRIEIANALHLNETQVKIWFQ 102


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 154 IGDEGFALKTYLMRPFPRASATQDERKT 237
           IGD GFALKT+  R   R   T  E K+
Sbjct: 389 IGDLGFALKTFGARYEYRGEITLAETKS 416


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,539
Number of Sequences: 2352
Number of extensions: 12487
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)