Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_M02
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     124   1e-30
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.         107   1e-25
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   9e-05
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   5.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   5.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   5.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   8.8  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  124 bits (299), Expect = 1e-30
 Identities = 54/112 (48%), Positives = 79/112 (70%)
 Frame = +1

Query: 229 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEM 408
           M   + F L WNN+ +++++ F  L    D VDVTLA +GR L+AH++VLS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 409 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQL 564
            K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L+SF+ TAE L++
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRV 112


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score =  107 bits (257), Expect = 1e-25
 Identities = 49/109 (44%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = +1

Query: 241 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLVLSVCSPYFQEMFKMN 420
           + + L WNN+ +NM++ FH LL     VDVTLA     L+AHK+VLS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 421 PTQHP-IVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQL 564
           P +HP I+  +DV  + L+ +++F+Y+GE++V Q EL S + TA+QL++
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKI 117


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 9e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 229 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 345
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 205 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 336
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -3

Query: 658 VLCCDDLGPGLEVGFGLDGVEL---SSF*LPVKPLTEVVP 548
           V C D L P L + + L    L    +  LPV PLTEV P
Sbjct: 114 VYCRDRLNPNLFI-YALSVAILHRPDTKDLPVPPLTEVFP 152


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -2

Query: 248 NCSSDAMIATTRRGTYPKLCTYNSGRRQHFG 156
           NC  D +    +RGT  + C + +   + +G
Sbjct: 479 NCDIDCINRVVQRGTKMQFCIFRTANGRGWG 509


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 478 LLQFMYQGEVNVKQEELASFI 540
           ++  +Y G VNV+ E + S++
Sbjct: 43  IIDEVYNGNVNVEDENVQSYV 63


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 206 FHVESSLSWRRTNNFHY 256
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,046
Number of Sequences: 438
Number of extensions: 4581
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)