Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_M01
         (1354 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome s...    38   0.79 
UniRef50_P13983 Cluster: Extensin precursor; n=1; Nicotiana taba...    36   2.4  
UniRef50_P08297 Cluster: Early nodulin 75 precursor; n=21; Eukar...    36   3.2  
UniRef50_Q2PET4 Cluster: Putative uncharacterized protein; n=1; ...    34   7.4  
UniRef50_Q6BL65 Cluster: Similar to ca|CA5216|IPF3069 Candida al...    34   7.4  

>UniRef50_Q4RSI9 Cluster: Chromosome 13 SCAF15000, whole genome
            shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome 13 SCAF15000, whole genome shotgun sequence -
            Tetraodon nigroviridis (Green puffer)
          Length = 307

 Score = 37.5 bits (83), Expect = 0.79
 Identities = 24/66 (36%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
 Frame = -3

Query: 1175 PPXFFXPPXXGXFFXXPPXFXPFF*FXPPXXKKKNX--FFXKKXXFSPPPLXXPPXXKPP 1002
            PP  F PP    FF  PP F P     PP         FF     F PPP   PP   PP
Sbjct: 209  PPSLFSPPP---FFSPPPSFPPLP--PPPYFSPLPLPPFFLLPFLFPPPPFFFPPKPNPP 263

Query: 1001 XXKXXG 984
                 G
Sbjct: 264  PPPPPG 269


>UniRef50_P13983 Cluster: Extensin precursor; n=1; Nicotiana
            tabacum|Rep: Extensin precursor - Nicotiana tabacum
            (Common tobacco)
          Length = 620

 Score = 35.9 bits (79), Expect = 2.4
 Identities = 19/68 (27%), Positives = 25/68 (36%)
 Frame = -1

Query: 1177 PPPXFXXPPXXXXFFXPPQXFXPFFNXPPPXXKKKTFFXXKKXFFPPPLWXXPLXXNPPF 998
            PPP +  PP    +  PP    P ++  PP     TF      + PPP +  P     P 
Sbjct: 285  PPPTYSPPPPSPIYSPPP----PAYSPSPPPTPTPTFSPPPPAYSPPPTYSPPPPTYLPL 340

Query: 997  XKXXXXSP 974
                  SP
Sbjct: 341  PSSPIYSP 348


>UniRef50_P08297 Cluster: Early nodulin 75 precursor; n=21;
            Eukaryota|Rep: Early nodulin 75 precursor - Glycine max
            (Soybean)
          Length = 309

 Score = 35.5 bits (78), Expect = 3.2
 Identities = 18/64 (28%), Positives = 24/64 (37%)
 Frame = -1

Query: 1183 KKPPPXFXXPPXXXXFFXPPQXFXPFFNXPPPXXKKKTFFXXKKXFFPPPLWXXPLXXNP 1004
            +KPPP +  P        PP  + P    PPP  +           +PPP    P    P
Sbjct: 207  EKPPPEYQPPQEKPPHEKPPPEYQPPHEKPPPEHQPP--HEKPPPVYPPPYEKPPPVYEP 264

Query: 1003 PFXK 992
            P+ K
Sbjct: 265  PYEK 268


>UniRef50_Q2PET4 Cluster: Putative uncharacterized protein; n=1;
            Trifolium pratense|Rep: Putative uncharacterized protein
            - Trifolium pratense (Red clover)
          Length = 478

 Score = 34.3 bits (75), Expect = 7.4
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = -3

Query: 1172 PXFFXPPXXGXFFXXPPXFXPFF*FXPPXXK---KKNXFFXKKXXFSPPPLXXPPXXKPP 1002
            P    PP     F  PP + P F   PP  K   ++  F+  K  F  PP+  PP  KPP
Sbjct: 388  PPIENPPIYKPPFEKPPIYKPPF-EKPPVYKPPIEEPPFY--KPPFENPPIYKPPYEKPP 444

Query: 1001 XXKXXGKXXPXF 966
              K   +  P +
Sbjct: 445  LYKPPFEKPPLY 456


>UniRef50_Q6BL65 Cluster: Similar to ca|CA5216|IPF3069 Candida
            albicans IPF3069; n=1; Debaryomyces hansenii|Rep: Similar
            to ca|CA5216|IPF3069 Candida albicans IPF3069 -
            Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 631

 Score = 34.3 bits (75), Expect = 7.4
 Identities = 19/60 (31%), Positives = 22/60 (36%)
 Frame = -1

Query: 1180 KPPPXFXXPPXXXXFFXPPQXFXPFFNXPPPXXKKKTFFXXKKXFFPPPLWXXPLXXNPP 1001
            +PPP    PP       PP+ F P F  PP       F   +    PPP    P    PP
Sbjct: 545  QPPPHLQYPPNMGP---PPKMFPPGFMPPPGMPMPSQFANGRNGPMPPPPGNHPYMGFPP 601


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,376,018
Number of Sequences: 1657284
Number of extensions: 6079018
Number of successful extensions: 9277
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8260
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 140513055373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)