BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_L24
(907 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 25 4.2
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 24 5.5
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 24.6 bits (51), Expect = 4.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 327 QVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGF 446
+VISS+Q H A GIP K V + RL G GF
Sbjct: 752 EVISSTQHP-TEIQHHVAQTLGIPASKVVSRVKRL-GGGF 789
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 24.2 bits (50), Expect = 5.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 254 DDSHCRCAEGGRSVPGSGRQHGRG 325
DD + GGR G GR GRG
Sbjct: 61 DDGYGGGGRGGRGGRGGGRGRGRG 84
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,484
Number of Sequences: 2352
Number of extensions: 10469
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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