Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_L20
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 96 3e-20
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 96 4e-20
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 95 7e-20
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 92 5e-19
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 91 1e-18
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 69 4e-12
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 66 3e-11
10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601 31 0.92
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 29 4.9
03_02_0649 - 10162202-10162366,10162455-10162533,10162614-101626... 29 6.5
12_02_0026 - 12423191-12423204,12423344-12423408,12423805-124238... 28 8.5
06_03_0754 + 24190778-24191284,24191735-24191784,24192311-241923... 28 8.5
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 96.3 bits (229), Expect = 3e-20
Identities = 44/98 (44%), Positives = 67/98 (68%)
Frame = +1
Query: 211 RSNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKH 390
+S + M V+S AS T CLAP+ K++ + +G+ EG +T++HA T + K +DG + K
Sbjct: 274 KSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSM--KD 331
Query: 391 WRDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
WR R QNIIP++TGA KA+GK++P++ KLTG +F
Sbjct: 332 WRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAF 369
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP NVSV+D++ R+ K ++ D+ I+ A ++ I+
Sbjct: 351 KAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGIL 410
Query: 629 RVTRDDNVSSDFAGD 673
T +D VS+DF GD
Sbjct: 411 GYTDEDVVSNDFVGD 425
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 95.9 bits (228), Expect = 4e-20
Identities = 44/92 (47%), Positives = 64/92 (69%)
Frame = +1
Query: 229 MKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHWRDHRS 408
M V+S AS T CLAP+ KI+ + +G++EG +T++HA T + K +DG + K WR R
Sbjct: 221 MNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSM--KDWRGGRG 278
Query: 409 IHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
QNIIP++TGA KA+GK++P + KLTG +F
Sbjct: 279 ASQNIIPSSTGAAKAVGKVLPALNGKLTGMAF 310
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +2
Query: 497 LAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENIIRVTRDDNVSSDFAGD 673
+AFRVP NVSV+D++ RL K +++D+ I+EA ++ I+ T +D VS+DF GD
Sbjct: 308 MAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGD 366
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 95.1 bits (226), Expect = 7e-20
Identities = 43/90 (47%), Positives = 63/90 (70%)
Frame = +1
Query: 235 VLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHWRDHRSIH 414
++S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG K WR R+
Sbjct: 171 IVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDG--PSSKDWRGGRAAS 228
Query: 415 QNIIPAATGACKALGKIMPQVKDKLTGFSF 504
NIIP++TGA KA+GK++P + KLTG SF
Sbjct: 229 FNIIPSSTGAAKAVGKVLPDLNGKLTGMSF 258
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +2
Query: 497 LAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENIIRVTRDDNVSSDFAGDE 676
++FRVP V+VSV+D+++R+ K ++ I I+ A K++ II +D VS+DF GD
Sbjct: 256 MSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDS 315
Query: 677 HXASWTGILAXAXPDS 724
+ + A D+
Sbjct: 316 RSSIFDAKAGIALNDN 331
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 92.3 bits (219), Expect = 5e-19
Identities = 41/92 (44%), Positives = 64/92 (69%)
Frame = +1
Query: 229 MKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHWRDHRS 408
+ ++S AS T CLAP+ K++ D +G+ EG +T++HA+T + K +DG + K WR R+
Sbjct: 165 VNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSM--KDWRGGRA 222
Query: 409 IHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
NIIP++TGA KA+GK++P + KLTG +F
Sbjct: 223 ASFNIIPSSTGAAKAVGKVLPALNGKLTGMAF 254
Score = 55.2 bits (127), Expect = 7e-08
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +2
Query: 497 LAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENIIRVTRDDNVSSDFAGDE 676
+AFRVP V+VSV+D+++RL K ++ I I+E K++ I+ +D VS+DF GD
Sbjct: 252 MAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDS 311
Query: 677 HXASWTGILAXAXPDS 724
+ + A D+
Sbjct: 312 RSSIFDAKAGIALSDT 327
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 91.1 bits (216), Expect = 1e-18
Identities = 41/90 (45%), Positives = 62/90 (68%)
Frame = +1
Query: 235 VLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHWRDHRSIH 414
++S AS T CLAP+ K++ D +G+ EG +T++HA+T + K +DG K WR R+
Sbjct: 196 IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDG--PSSKDWRGGRAAS 253
Query: 415 QNIIPAATGACKALGKIMPQVKDKLTGFSF 504
NIIP++TGA KA+GK++P + KLTG +F
Sbjct: 254 FNIIPSSTGAAKAVGKVLPALNGKLTGMAF 283
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +2
Query: 497 LAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENIIRVTRDDNVSSDFAGDE 676
+AFRVP V+VSV+D+++RL K ++ I I+E K++ I+ +D VS+DF GD
Sbjct: 281 MAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDN 340
Query: 677 HXASWTGILAXAXPDS 724
+ + A D+
Sbjct: 341 RSSIFDAKAGIALNDN 356
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 69.3 bits (162), Expect = 4e-12
Identities = 34/89 (38%), Positives = 55/89 (61%)
Frame = +1
Query: 235 VLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHWRDHRSIH 414
++S AS T CLAP +KIL++ +G+ +G +T+ H+ T + LD + R R+
Sbjct: 225 IISNASCTTNCLAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDA---SHRDLRRARAAA 281
Query: 415 QNIIPAATGACKALGKIMPQVKDKLTGFS 501
NI+P +TGA KA+ ++PQ+K KL G +
Sbjct: 282 LNIVPTSTGAAKAVALVLPQLKGKLNGIA 310
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKE-TTWQDILKKIEEAGRXKMENI 625
K +A +LK +A RVP NVSV+D+ I K T D+ +A + I
Sbjct: 293 KAVALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGI 352
Query: 626 IRVTRDDNVSSDF 664
+ V VS DF
Sbjct: 353 LDVCDVPLVSVDF 365
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/89 (37%), Positives = 53/89 (59%)
Frame = +1
Query: 235 VLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHWRDHRSIH 414
++S AS T CLAP +KIL+ +G+ +G +T+ H+ T + LD + R R+
Sbjct: 213 IISNASCTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQRLLDA---SHRDLRRARAAA 269
Query: 415 QNIIPAATGACKALGKIMPQVKDKLTGFS 501
NI+P +TGA KA+ ++P +K KL G +
Sbjct: 270 LNIVPTSTGAAKAVALVLPNLKGKLNGIA 298
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K +A LK +A RVP NVSV+D+ +++ K+T +++ + ++ +++ I+
Sbjct: 281 KAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGIL 340
Query: 629 RVTRDDNVSSDF 664
V VS DF
Sbjct: 341 EVCDVPLVSVDF 352
>10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601
Length = 371
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 187 IIRIFYIFRSNEHHMKVLSCASSTL---YCLAPVIKILEDNYGVSEGFVT 327
++ +FY+F S H + + +S + +CL+P + + GV + FV+
Sbjct: 69 LLLMFYLFSSVSHLVTAFTAVASAMALFFCLSPYVNCVRSRLGVGDPFVS 118
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +1
Query: 142 SIRYSQSYT*T*LKLIIRIFYIFRSNEHHMKVLSCASSTLYCLAPVIKILEDNY 303
+IRY Q +++ +FY+F+++ S + T +C ++ +DNY
Sbjct: 265 TIRYVQGMN----EVLAPLFYVFKNDPDTSNSASAEADTFFCFVELLSGFKDNY 314
>03_02_0649 -
10162202-10162366,10162455-10162533,10162614-10162670,
10162741-10162847,10163365-10163580,10163690-10163734,
10164100-10164258,10164714-10164818,10164902-10165084,
10165490-10165546,10165625-10165720,10166970-10167104,
10167188-10167262,10167380-10167479,10167682-10167842,
10167921-10168068,10168706-10169111,10169794-10169860,
10169953-10170162,10170570-10170711,10170809-10170870,
10170965-10171037,10171876-10171985,10172087-10172227
Length = 1032
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVS-EGFVTS-IHAMTPSLKPLD 366
S H +L C C + IL DNYGV FV S IH + PL+
Sbjct: 422 SFHHEQNLLQCTEKRRPCAEALFIILFDNYGVQLAPFVASIIHDVKAVSPPLE 474
>12_02_0026 -
12423191-12423204,12423344-12423408,12423805-12423875,
12424588-12424663,12425714-12425794,12425989-12426050
Length = 122
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 649 VIIPCYPYNVLHL 611
+I PCY YNVLHL
Sbjct: 11 IIYPCYGYNVLHL 23
>06_03_0754 +
24190778-24191284,24191735-24191784,24192311-24192383,
24192577-24192717,24193635-24194039,24194215-24194319,
24194635-24194775,24195330-24195533,24196206-24196292,
24196689-24196800,24197972-24198015
Length = 622
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 223 HHMKVLSCASSTLYCLAPV 279
H +KVL+C S +Y LAPV
Sbjct: 389 HSIKVLNCHDSVIYILAPV 407
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,499,498
Number of Sequences: 37544
Number of extensions: 405853
Number of successful extensions: 853
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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