Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_L20
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 105 5e-23
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 105 5e-23
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 104 7e-23
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 104 7e-23
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 104 7e-23
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 103 2e-22
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 103 2e-22
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 103 2e-22
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 103 2e-22
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 105 bits (251), Expect = 5e-23
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
SN+H V+S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 SNDH---VISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D+++RL K + DI K ++ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGDEHXASW-TGILAXAXPDSTK 730
T D VS+DF D H + + TG P+ K
Sbjct: 281 AYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVK 315
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 105 bits (251), Expect = 5e-23
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
SN+H V+S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 SNDH---VISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D+++RL K + DI K ++ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGDEHXASW-TGILAXAXPDSTK 730
T D VS+DF D H + + TG P+ K
Sbjct: 281 AYTEDQVVSTDFVSDPHSSIFDTGACISLNPNFVK 315
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 104 bits (250), Expect = 7e-23
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
SN+H V+S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 SNDH---VVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D+++RL K + DI K ++ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGDEH 679
T D VS+DF D H
Sbjct: 281 AYTEDQVVSTDFVSDPH 297
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 104 bits (250), Expect = 7e-23
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
SN+H V+S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 SNDH---VVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D+++RL K + DI K ++ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGDEH 679
T D VS+DF D H
Sbjct: 281 AYTEDQVVSTDFVSDPH 297
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 104 bits (250), Expect = 7e-23
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
SN+H V+S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 SNDH---VVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D+++RL K + DI K ++ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGDEH 679
T D VS+DF D H
Sbjct: 281 AYTEDQVVSTDFVSDPH 297
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 103 bits (247), Expect = 2e-22
Identities = 48/97 (49%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
+N+H ++S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 ANDH---IISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 51.2 bits (117), Expect = 9e-07
Identities = 29/75 (38%), Positives = 41/75 (54%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D++ RL K + DI K I+ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGD 673
T D VS+DF D
Sbjct: 281 AYTEDQVVSTDFVSD 295
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 103 bits (247), Expect = 2e-22
Identities = 48/97 (49%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
+N+H ++S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 ANDH---IISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 51.2 bits (117), Expect = 9e-07
Identities = 29/75 (38%), Positives = 41/75 (54%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D++ RL K + DI K I+ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGD 673
T D VS+DF D
Sbjct: 281 AYTEDQVVSTDFVSD 295
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 103 bits (247), Expect = 2e-22
Identities = 48/97 (49%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
+N+H ++S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 ANDH---IISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 51.2 bits (117), Expect = 9e-07
Identities = 29/75 (38%), Positives = 41/75 (54%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D++ RL K + DI K I+ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGD 673
T D VS+DF D
Sbjct: 281 AYTEDQVVSTDFVSD 295
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 103 bits (247), Expect = 2e-22
Identities = 48/97 (49%), Positives = 70/97 (72%)
Frame = +1
Query: 214 SNEHHMKVLSCASSTLYCLAPVIKILEDNYGVSEGFVTSIHAMTPSLKPLDGLCLRGKHW 393
+N+H ++S AS T CLAP+ K++ DN+G+ EG +T++HA+T + K +DG GK W
Sbjct: 148 ANDH---IISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPS--GKLW 202
Query: 394 RDHRSIHQNIIPAATGACKALGKIMPQVKDKLTGFSF 504
RD R QNIIPA+TGA KA+GK++P++ KLTG +F
Sbjct: 203 RDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAF 239
Score = 51.2 bits (117), Expect = 9e-07
Identities = 29/75 (38%), Positives = 41/75 (54%)
Frame = +2
Query: 449 KPLAKSCHKLKTN*PXLAFRVPIVNVSVLDISIRLCKETTWQDILKKIEEAGRXKMENII 628
K + K +L +AFRVP +VSV+D++ RL K + DI K I+ A M+ I+
Sbjct: 221 KAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGIL 280
Query: 629 RVTRDDNVSSDFAGD 673
T D VS+DF D
Sbjct: 281 AYTEDQVVSTDFVSD 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,452,453
Number of Sequences: 27780
Number of extensions: 379911
Number of successful extensions: 901
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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