Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L19
         (877 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537557-1|CAD97781.1|  410|Homo sapiens hypothetical protein pr...    35   0.34 
BT007129-1|AAP35793.1|  410|Homo sapiens COX15 homolog, cytochro...    35   0.34 
BC078161-1|AAH78161.1|  410|Homo sapiens COX15 homolog, cytochro...    35   0.34 
BC013403-1|AAH13403.1|  410|Homo sapiens COX15 homolog, cytochro...    35   0.34 
BC002382-1|AAH02382.3|  410|Homo sapiens COX15 homolog, cytochro...    35   0.34 
AL133353-4|CAB88198.1|  410|Homo sapiens COX15 homolog, cytochro...    35   0.34 
AL133353-3|CAB88197.1|  388|Homo sapiens COX15 homolog, cytochro...    35   0.34 
AF044323-1|AAD08646.1|  388|Homo sapiens cytochrome c oxidase as...    35   0.34 
AF026850-1|AAD08639.1|  410|Homo sapiens cytochrome oxidase asse...    35   0.34 

>BX537557-1|CAD97781.1|  410|Homo sapiens hypothetical protein
           protein.
          Length = 410

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLAESGL 97


>BT007129-1|AAP35793.1|  410|Homo sapiens COX15 homolog, cytochrome
           c oxidase assembly protein (yeast) protein.
          Length = 410

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


>BC078161-1|AAH78161.1|  410|Homo sapiens COX15 homolog, cytochrome
           c oxidase assembly protein (yeast) protein.
          Length = 410

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


>BC013403-1|AAH13403.1|  410|Homo sapiens COX15 homolog, cytochrome
           c oxidase assembly protein (yeast) protein.
          Length = 410

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


>BC002382-1|AAH02382.3|  410|Homo sapiens COX15 homolog, cytochrome
           c oxidase assembly protein (yeast) protein.
          Length = 410

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


>AL133353-4|CAB88198.1|  410|Homo sapiens COX15 homolog, cytochrome
           c oxidase assembly protein (yeast) protein.
          Length = 410

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


>AL133353-3|CAB88197.1|  388|Homo sapiens COX15 homolog, cytochrome
           c oxidase assembly protein (yeast) protein.
          Length = 388

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


>AF044323-1|AAD08646.1|  388|Homo sapiens cytochrome c oxidase
           assembly protein COX15 protein.
          Length = 388

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


>AF026850-1|AAD08639.1|  410|Homo sapiens cytochrome oxidase
           assembly factor protein.
          Length = 410

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 515 STPKPKTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           S P     + VG WLL CSG V  AV+LG V+ +  + L
Sbjct: 59  SLPSKAAERVVGRWLLVCSGTVAGAVILGGVTRLTESGL 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,100,880
Number of Sequences: 237096
Number of extensions: 1452758
Number of successful extensions: 1924
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)