Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L19
         (877 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amin...    29   3.3  
AL132862-1|CAB60529.2|  434|Caenorhabditis elegans Hypothetical ...    29   3.3  

>Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical
           protein T06D8.5 protein.
          Length = 395

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +2

Query: 530 KTSKAVGYWLLGCSGMVFTAVVLGMVSGIYXNAL 631
           K+ K +G+WL+GC+GM + AV LG V+ +  + L
Sbjct: 46  KSRKRIGWWLMGCAGMCYGAVALGGVTRLTESGL 79


>Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical
           protein ZK829.2 protein.
          Length = 905

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 437 HRYNILGRLSLSSTIKSNSIIMRFCSSTPK 526
           +R N  G +SL+S +  N  ++R C ++PK
Sbjct: 757 YRCNETGNVSLASCVLQNKFVIRMCINSPK 786


>Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amino
           acid  decarboxylaseprotein.
          Length = 625

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 437 HRYNILGRLSLSSTIKSNSIIMRFCSSTPK 526
           +R N  G +SL+S +  N  ++R C ++PK
Sbjct: 477 YRCNETGNVSLASCVLQNKFVIRMCINSPK 506


>AL132862-1|CAB60529.2|  434|Caenorhabditis elegans Hypothetical
           protein Y73F8A.2 protein.
          Length = 434

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 461 LSLSSTIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVV 595
           LS+SS +           S PK    KA+  W+  C G +F +++
Sbjct: 298 LSVSSLMALTFQFGNIVKSLPKASYVKAIDIWMFSCVGFIFFSLI 342


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,188,421
Number of Sequences: 27780
Number of extensions: 229257
Number of successful extensions: 495
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)