Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_L17
(914 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 220 7e-57
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 220 7e-57
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 220 7e-57
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 218 3e-56
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 210 5e-54
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 135 2e-31
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 134 6e-31
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 67 7e-11
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 169
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 220 bits (537), Expect = 7e-57
Identities = 99/169 (58%), Positives = 127/169 (75%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 218 bits (532), Expect = 3e-56
Identities = 98/169 (57%), Positives = 126/169 (74%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 210 bits (513), Expect = 5e-54
Identities = 95/169 (56%), Positives = 124/169 (73%)
Frame = +2
Query: 86 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 265
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+ NKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 266 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 445
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 446 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 135 bits (327), Expect = 2e-31
Identities = 59/111 (53%), Positives = 77/111 (69%)
Frame = +2
Query: 260 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 439
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 440 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LED RK KA ++ Y KK
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKA--KIHYRKK 110
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 134 bits (323), Expect = 6e-31
Identities = 58/111 (52%), Positives = 77/111 (69%)
Frame = +2
Query: 260 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 439
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 440 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKAVKRVAYEKK 592
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA ++ Y KK
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 110
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 67.3 bits (157), Expect = 7e-11
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +2
Query: 332 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 511
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 512 WKYRDVVRKLEDXRKGKAVKRVAYEKK 592
WKY+ V LE+ RK KA ++ Y KK
Sbjct: 61 WKYQAVTATLEEKRKEKA--KIHYWKK 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,028,656
Number of Sequences: 237096
Number of extensions: 1852793
Number of successful extensions: 18086
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18085
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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