Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_L16
(879 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5CVR4 Cluster: Swr1p like SWI/SNF2 family ATpase with ... 38 0.34
UniRef50_A5TXK1 Cluster: Putative uncharacterized protein; n=1; ... 35 3.1
UniRef50_Q7RPL8 Cluster: Ubiquitin carboxyl-terminal hydrolase f... 34 4.1
UniRef50_Q7M9I0 Cluster: MULTIDRUG EFFLUX TRANSPORTER; n=18; Pro... 33 7.2
UniRef50_A5I6W4 Cluster: Putative secreted protein precursor; n=... 33 9.6
UniRef50_Q5K8D7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
>UniRef50_Q5CVR4 Cluster: Swr1p like SWI/SNF2 family ATpase with a HSA
domain at the N-terminus probably involved in chromatin
remodelling; n=3; Apicomplexa|Rep: Swr1p like SWI/SNF2
family ATpase with a HSA domain at the N-terminus
probably involved in chromatin remodelling -
Cryptosporidium parvum Iowa II
Length = 1371
Score = 37.9 bits (84), Expect = 0.34
Identities = 36/130 (27%), Positives = 57/130 (43%)
Frame = -1
Query: 747 SIFISLVTINCTLSRKLPSLRRNISRPS*LAISRLNNVAKYCHLFA*TV*YSFITIVLSS 568
S I I T+S +P L +NIS + L I + N +KY LF + F+ I
Sbjct: 649 SSLIFFPNICITMSSNVPGLGKNISTNNYLYIGKKTNKSKYTTLFDKLTNHRFVNI---P 705
Query: 567 NLFKQIVRMDFKKTGFGDR*EISIMSL*RPKNCIFNWNLE*VNSVFGSLAFSTRNSLLVT 388
N+F + K + E++ ++C N+N+E NS+F T N L +
Sbjct: 706 NIFILYNEIHMSKFQAQSQCELTYKKWTGMQSC--NYNIE--NSLFSKRTIGTENLLEI- 760
Query: 387 FSNRLTNVGM 358
NR +G+
Sbjct: 761 --NRFIRIGL 768
>UniRef50_A5TXK1 Cluster: Putative uncharacterized protein; n=1;
Fusobacterium nucleatum subsp. polymorphum ATCC
10953|Rep: Putative uncharacterized protein -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 195
Score = 34.7 bits (76), Expect = 3.1
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 41 FGFLAILAFLAQIYSKFGIVYIIWGRIIY*IHTLEQNCFNFSTQRN*SEPQSNV--NILV 214
F FL L +A IY FG RII + + ++ ++Q N EP + + ++L
Sbjct: 96 FSFLKFLDTIA-IYISFGFTGYYLLRII---SIKQHDIYDVNSQINYQEPYATILNDLLF 151
Query: 215 KYKEISNKHEGTNTLGVNKYRINLINM 295
+KEI N H N ++ +LI++
Sbjct: 152 NFKEIINSHRNNNEKRAKDFKQSLISL 178
>UniRef50_Q7RPL8 Cluster: Ubiquitin carboxyl-terminal hydrolase family
2, putative; n=1; Plasmodium yoelii yoelii|Rep: Ubiquitin
carboxyl-terminal hydrolase family 2, putative -
Plasmodium yoelii yoelii
Length = 2798
Score = 34.3 bits (75), Expect = 4.1
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +2
Query: 281 NLINMSSTNYTTRTEGQTKICTIIWTIPTFVNLLENVTKREFRVEKAKDPKTEFTHSKFQ 460
N N S T+ +T + + CTI T+ ++ + K+ + EK T+ H K
Sbjct: 1357 NSNNQSDTSISTESSAHSG-CTIT-TLDNYIKYISK--KQNLKTEKKTPRNTKIRHKKAP 1412
Query: 461 LKMQFLGRYNDIIEIS-YLSPNPVFLKSILTICLKRFEERTIVIKEYHTVQANKWQYLAT 637
K + + N+II+ + + N + K+ + ++ ++ I+ K++ +Q N Y +
Sbjct: 1413 KKKNKIIKKNEIIKKNEIIKKNEIIKKNEIMKKNEKIKKNEIIKKKH--IQNNHSHY--S 1468
Query: 638 LFKRDIASYDGRD 676
FK + +SYD D
Sbjct: 1469 KFKSN-SSYDSED 1480
>UniRef50_Q7M9I0 Cluster: MULTIDRUG EFFLUX TRANSPORTER; n=18;
Proteobacteria|Rep: MULTIDRUG EFFLUX TRANSPORTER -
Wolinella succinogenes
Length = 1044
Score = 33.5 bits (73), Expect = 7.2
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = -1
Query: 324 SVRVV*FVLDMFIRLMRYLLTPSVFVPSCLL 232
++ +V FV+ +F++ +RY L PS+ VP CLL
Sbjct: 348 AIVLVFFVILLFLQNLRYTLIPSIVVPVCLL 378
>UniRef50_A5I6W4 Cluster: Putative secreted protein precursor; n=4;
Clostridium botulinum|Rep: Putative secreted protein
precursor - Clostridium botulinum A str. ATCC 3502
Length = 270
Score = 33.1 bits (72), Expect = 9.6
Identities = 37/172 (21%), Positives = 73/172 (42%), Gaps = 1/172 (0%)
Frame = +2
Query: 191 QSNVNILVKYKEISNKHEGTNTLGVNKYRINLINMSSTNYTTRTEGQTKICTIIWTIPTF 370
+ N+ I + Y E SNK++ ++ +NK + S N T +T+ ++
Sbjct: 103 EDNMKIKLIYIEDSNKNKTIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLV----NL 158
Query: 371 VNLLENVTKREFRVEKAKD-PKTEFTHSKFQLKMQFLGRYNDIIEISYLSPNPVFLKSIL 547
+++T +++ K SK L ++ D I+Y+S P F K+
Sbjct: 159 NGEKQDITNKQYTSTSGTTFQKDAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTK 218
Query: 548 TICLKRFEERTIVIKEYHTVQANKWQYLATLFKRDIASYDGRDIFLLSDGSL 703
+ + + +T + + + + K+ L K DGR +FL +DGS+
Sbjct: 219 YVWMYNIKNKTHLYNQNISGEDIKFDKLTE--KGLTVVSDGRTLFLKADGSI 268
>UniRef50_Q5K8D7 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 377
Score = 33.1 bits (72), Expect = 9.6
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = -3
Query: 493 VIITAQKLHFQLELRVSKFRF---WVFSFFNSKFPLGHIFQQIDERRYG-PYYSTYFCLS 326
+I + LH EL + KF W+ FFN + + HI I Y Y+ Y S
Sbjct: 130 IIAIERWLHIDCELSLQKFVMKTNWLLMFFNKTYAMVHIPATIAFMAYSYRYFKPYIFQS 189
Query: 325 LRARCIIC 302
R ++C
Sbjct: 190 TRRTLVLC 197
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,456,738
Number of Sequences: 1657284
Number of extensions: 15605469
Number of successful extensions: 39452
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39427
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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