Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L16
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0263 - 16311650-16311675,16312101-16312149,16312987-163131...    30   2.1  
02_04_0438 + 22947088-22947181,22947506-22947596,22949337-22949475     28   8.6  

>10_08_0263 -
           16311650-16311675,16312101-16312149,16312987-16313167,
           16313900-16314722,16314749-16314818
          Length = 382

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
 Frame = +2

Query: 116 RIIY*IHTLEQNCFNFST--QRN*SEPQSNVNILVKYKEISNKHEGTNTLGVNKYRINLI 289
           R+ + +   +Q  F  ST  Q     P+S V +  ++ E + KHE    L  +++     
Sbjct: 45  RLFFHVENEQQVIFPDSTDLQEIIRHPRSGVTMFTEWMETNKKHEDARELTYSEFPTKWT 104

Query: 290 NMSSTNYTTRTEGQTKICTIIWTIPT-----FVNLLENVTKREFRVEKAKDPKTEFTHSK 454
            ++      R +G+ KI  I    P      ++ ++ N  K     E  +     F HS 
Sbjct: 105 WVNKVKKWVRRKGRKKIGRIYNAHPASGERYYLRVILNTAKGCTTFEDIR-TVNGFVHSS 163

Query: 455 FQLKMQFLGRYND 493
           ++     LG  ND
Sbjct: 164 YKSACHALGFLND 176


>02_04_0438 + 22947088-22947181,22947506-22947596,22949337-22949475
          Length = 107

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 666 MAVIYSSLVMEVYDLKYNLWSPMI*K*TVQQYLKHN 773
           +A +  S ++E YD KY    P + K T  QYL H+
Sbjct: 70  LAALVGSAMVEYYDAKYGTSGPKVDKYT-SQYLAHS 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,114,857
Number of Sequences: 37544
Number of extensions: 383937
Number of successful extensions: 777
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)