Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L16
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.5  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           22   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 163 KVKTVLLKCMYLINDSTPNNINYTKLGIDL 74
           K+    L C + +ND  P+ I Y K+   L
Sbjct: 556 KITRNSLDCFFTMNDLEPSEIFYEKIETSL 585


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 163 KVKTVLLKCMYLINDSTPNNINYTKLGIDL 74
           K+    L C + +ND  P+ I Y K+   L
Sbjct: 556 KITRNSLDCFFTMNDLEPSEIFYEKIETSL 585


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 702 YDLKYNLWSPM 734
           +DLKYN W P+
Sbjct: 268 WDLKYNTWEPI 278


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -2

Query: 542  WTSKKPDLVIDKKSLLCHYNG 480
            W S     V+D   + C+Y G
Sbjct: 939  WVSDNAHKVVDASDVWCYYGG 959


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 536 KSILTICLKRFEERTIVIKEYHTVQANKWQYLA 634
           K  LT  ++ FEE+ I+     T+  N++ YL+
Sbjct: 40  KEELTKLVQGFEEQDILTSSGVTLAGNRYIYLS 72


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 426 SLAFSTRNSLLVTFSNRLTNVGMV 355
           S+ F   NSL +++ ++LTN+G +
Sbjct: 226 SIDFDRMNSLGLSWLDQLTNLGFL 249


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -1

Query: 426 SLAFSTRNSLLVTFSNRLTNVGMV 355
           S+ F   NSL +++ ++LTN+G +
Sbjct: 264 SIDFDRMNSLGLSWLDQLTNLGFL 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,018
Number of Sequences: 438
Number of extensions: 5218
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)