Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L10
         (931 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   10.0 

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 724 PPPPPQXPPXXPPXG 768
           PPPPP  PP  P  G
Sbjct: 586 PPPPPMGPPPSPLAG 600



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 724 PPPPPQXPPXXPP 762
           PP PP  PP  PP
Sbjct: 582 PPAPPPPPPMGPP 594



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +1

Query: 472 PQXXXPPPXGGGXXXXGPPPPXPPXXN 552
           P    PPP  GG     PP   PP  N
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLN 553


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
 Frame = +1

Query: 664 GPXRTXKXT--KXXRPXGKFXXPP--PPPQXPPXXP 759
           GP RT   T  +  RP G +  PP  P P  P   P
Sbjct: 199 GPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPP 234


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 10.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 724 PPPPPQXPPXXPPXG 768
           PPPPP  P    P G
Sbjct: 784 PPPPPPPPSSLSPGG 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,705
Number of Sequences: 2352
Number of extensions: 5451
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)