Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_L10
(931 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.072
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.072
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.072
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 0.83
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 25 1.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.3
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 28 8.3
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 8.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.3
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 8.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.3
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.072
Identities = 28/94 (29%), Positives = 28/94 (29%)
Frame = +1
Query: 262 GGG*PPXTXKXAXXGXPPPPXXRXXXXXXGXEXXALLIXPXPXXGGGXXXAPPRFPXFLX 441
GG PP G PPPP G P GG PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP------- 763
Query: 442 RXXXXXXXXXPQXXXPPPXGGGXXXXGPPPPXPP 543
P PPP GG GPPPP PP
Sbjct: 764 -----PPGGCPPPPPPPPPGG--FKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.072
Identities = 28/94 (29%), Positives = 28/94 (29%)
Frame = +1
Query: 262 GGG*PPXTXKXAXXGXPPPPXXRXXXXXXGXEXXALLIXPXPXXGGGXXXAPPRFPXFLX 441
GG PP G PPPP G P GG PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP------- 763
Query: 442 RXXXXXXXXXPQXXXPPPXGGGXXXXGPPPPXPP 543
P PPP GG GPPPP PP
Sbjct: 764 -----PPGGCPPPPPPPPPGG--FKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.072
Identities = 28/94 (29%), Positives = 28/94 (29%)
Frame = +1
Query: 262 GGG*PPXTXKXAXXGXPPPPXXRXXXXXXGXEXXALLIXPXPXXGGGXXXAPPRFPXFLX 441
GG PP G PPPP G P GG PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP------- 346
Query: 442 RXXXXXXXXXPQXXXPPPXGGGXXXXGPPPPXPP 543
P PPP GG GPPPP PP
Sbjct: 347 -----PPGGCPPPPPPPPPGG--FKGGPPPPPPP 373
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.1 bits (57), Expect(2) = 0.83
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 487 PPPXGGGXXXXGPPPPXP 540
PPP G GPPPP P
Sbjct: 539 PPPPPVGMANGGPPPPPP 556
Score = 25.8 bits (54), Expect(2) = 8.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 472 PQXXXPPPXGGGXXXXGPPPPXP 540
P PPP G PPPP P
Sbjct: 536 PTPPPPPPVGMANGGPPPPPPLP 558
Score = 23.0 bits (47), Expect(2) = 0.83
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 520 GPPPPXPP 543
GPPPP PP
Sbjct: 575 GPPPPPPP 582
Score = 20.6 bits (41), Expect(2) = 8.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 523 PPPPXPP 543
PPPP PP
Sbjct: 578 PPPPPPP 584
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 472 PQXXXPPPXGGGXXXXGPPPPXPP 543
P PPP GGG PPPP PP
Sbjct: 39 PPPPPPPPCGGG--YEAPPPPPPP 60
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3
Query: 761 GGXXGGXWGGGGG 723
G GG WGGGGG
Sbjct: 226 GYGSGGGWGGGGG 238
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 746 GXWGGGGGXXNFPXG 702
G WGGGGG + G
Sbjct: 245 GGWGGGGGGRGYGGG 259
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/87 (31%), Positives = 29/87 (33%)
Frame = +1
Query: 274 PPXTXKXAXXGXPPPPXXRXXXXXXGXEXXALLIXPXPXXGGGXXXAPPRFPXFLXRXXX 453
PP K G PPPP G E A P P G G PP P +
Sbjct: 33 PPPPPKGT--GTPPPPPTGEPQDLSG-EGNASRRPPPPPKGTG---TPPPPPTGEPQDLS 86
Query: 454 XXXXXXPQXXXPPPXGGGXXXXGPPPP 534
+ PPP G G PPPP
Sbjct: 87 AEEGNASRRPPPPPKGTGTP---PPPP 110
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/87 (29%), Positives = 26/87 (29%)
Frame = +1
Query: 274 PPXTXKXAXXGXPPPPXXRXXXXXXGXEXXALLIXPXPXXGGGXXXAPPRFPXFLXRXXX 453
PP K G PPPP E A P P G G PP
Sbjct: 64 PPPPPKGT--GTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEG 121
Query: 454 XXXXXXPQXXXPPPXGGGXXXXGPPPP 534
P PPP G G PPPP
Sbjct: 122 NASRRPP----PPPKGTG----SPPPP 140
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 676 TXKXTKXXRPXGKFXXPPPPPQXPPXXPP 762
T T P PPPPP PP PP
Sbjct: 770 TTTTTTIPPPFFALPVPPPPPVPPPPPPP 798
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 490 PPXGGGXXXXGPPPPXPP 543
P GGG PPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 490 PPXGGGXXXXGPPPPXPP 543
P GGG PPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPP 37
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 724 PPPPPQXPPXXPPXGXG 774
PPPPP PP PP G G
Sbjct: 364 PPPPPSRPP-APPSGHG 379
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 490 PPXGGGXXXXGPPPPXPP 543
P GGG PPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPP 37
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 724 PPPPPQXPPXXPP 762
PPPPP PP PP
Sbjct: 134 PPPPPSPPPPPPP 146
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 703 PXGKFXXPPPPPQXPPXXPP 762
P PPPPP PP PP
Sbjct: 57 PPPPMCPPPPPPPPPPMCPP 76
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 724 PPPPPQXPPXXPP 762
PPPPP PP PP
Sbjct: 68 PPPPPMCPPPPPP 80
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 724 PPPPPQXPPXXPPXGXG 774
PPPPP PP PP G G
Sbjct: 374 PPPPPSRPP-APPSGHG 389
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 472 PQXXXPPPXGGGXXXXGPPPPXP 540
PQ PPP GPPPP P
Sbjct: 1761 PQYQQPPPMQSYGISSGPPPPPP 1783
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/96 (26%), Positives = 25/96 (26%)
Frame = +1
Query: 256 PXGGG*PPXTXKXAXXGXPPPPXXRXXXXXXGXEXXALLIXPXPXXGGGXXXAPPRFPXF 435
P G PP A PPP A P GG PP P
Sbjct: 361 PQSFGGPPPPVSSAPGNFAPPPQS-GPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPG- 418
Query: 436 LXRXXXXXXXXXPQXXXPPPXGGGXXXXGPPPPXPP 543
P PPP GG PP PP
Sbjct: 419 -APGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 472 PQXXXPPPXGGGXXXXGPPPPXP 540
PQ PPP GPPPP P
Sbjct: 386 PQYQQPPPMQSYGISSGPPPPPP 408
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,653,112
Number of Sequences: 27780
Number of extensions: 176763
Number of successful extensions: 2711
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2097
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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