Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L09
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U97012-9|AAK39142.2|  995|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical pr...    29   6.0  
U00032-4|AAL32216.1|  953|Caenorhabditis elegans Rabphilin prote...    28   7.9  
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote...    28   7.9  
U00032-2|AAL32218.1|  962|Caenorhabditis elegans Rabphilin prote...    28   7.9  
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote...    28   7.9  
AF399852-1|AAK84870.1|  953|Caenorhabditis elegans rabphilin pro...    28   7.9  

>Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 581 PEQYERLARRVEMRFDLESTGAWSSAVELALAATRPEHRARXQTAL 718
           P+Q+ R+ RR EMR  LE++G    A +  L  +R  H  + +  L
Sbjct: 309 PKQFNRIMRRREMRQQLEASGRLPLARQKYLHESRHLHALKRKRGL 354


>Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 581 PEQYERLARRVEMRFDLESTGAWSSAVELALAATRPEHRARXQTAL 718
           P+Q+ R+ RR EMR  LE++G    A +  L  +R  H  + +  L
Sbjct: 309 PKQFNRIMRRREMRQQLEASGRLPLARQKYLHESRHLHALKRKRGL 354


>U97012-9|AAK39142.2|  995|Caenorhabditis elegans Hypothetical
           protein C04E6.11 protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 616 LHAPRQPLVLLR-CLQLQREAERVQPRQLLHRGARVL 509
           LH P   + LLR CLQ   +  R+  + +LHRG+  L
Sbjct: 792 LHCPNGTVALLRHCLQQNTDEARMNLQFVLHRGSTFL 828


>U97010-1|AAB52322.1|  334|Caenorhabditis elegans Hypothetical
           protein W08A12.4 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 463 AQVLQHQCFLEPPRPRAVQRGEH 395
           +Q+L+H+C +  PRP  ++  +H
Sbjct: 220 SQILEHRCLVSSPRPTDIEEWKH 242


>U00032-4|AAL32216.1|  953|Caenorhabditis elegans Rabphilin protein
           1, isoform a protein.
          Length = 953

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 51  PLGQRARHDGHRGAG-PRQLCAPRR 122
           PL Q+A HD H G G PR++  P R
Sbjct: 457 PLQQQASHDHHSGGGTPRRISNPDR 481


>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
           1, isoform b protein.
          Length = 1028

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 51  PLGQRARHDGHRGAG-PRQLCAPRR 122
           PL Q+A HD H G G PR++  P R
Sbjct: 532 PLQQQASHDHHSGGGTPRRISNPDR 556


>U00032-2|AAL32218.1|  962|Caenorhabditis elegans Rabphilin protein
           1, isoform c protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 51  PLGQRARHDGHRGAG-PRQLCAPRR 122
           PL Q+A HD H G G PR++  P R
Sbjct: 466 PLQQQASHDHHSGGGTPRRISNPDR 490


>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
           1, isoform d protein.
          Length = 1106

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 51  PLGQRARHDGHRGAG-PRQLCAPRR 122
           PL Q+A HD H G G PR++  P R
Sbjct: 610 PLQQQASHDHHSGGGTPRRISNPDR 634


>AF399852-1|AAK84870.1|  953|Caenorhabditis elegans rabphilin
           protein.
          Length = 953

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 51  PLGQRARHDGHRGAG-PRQLCAPRR 122
           PL Q+A HD H G G PR++  P R
Sbjct: 457 PLQQQASHDHHSGGGTPRRISNPDR 481


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,925,292
Number of Sequences: 27780
Number of extensions: 188584
Number of successful extensions: 581
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)