Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L08
         (937 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi...    31   4.6  
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi...    31   4.6  
BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        31   8.0  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     31   8.0  

>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
            frame 45 protein.
          Length = 1137

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +3

Query: 783  PXXXPXXXPLVPXPAPDPXX*TKTXPPXISXGXXXPNXKPPPXPXP 920
            P   P   P  P P P P       PP +  G       PPP P P
Sbjct: 919  PPPPPPPPPPPPPPPPPPPPPPPPPPPALDVGETSNLQPPPPLPPP 964


>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
            frame 45 protein.
          Length = 1137

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +3

Query: 783  PXXXPXXXPLVPXPAPDPXX*TKTXPPXISXGXXXPNXKPPPXPXP 920
            P   P   P  P P P P       PP +  G       PPP P P
Sbjct: 919  PPPPPPPPPPPPPPPPPPPPPPPPPPPALDVGETSNLQPPPPLPPP 964


>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +3

Query: 783 PXXXPXXXPLVPXPAPDPXX*TKTXPPXISXGXXXPNXKP-PPXPXPXXGXP 935
           P   P   P  P P P P     + PP ++     P   P PP P P    P
Sbjct: 97  PPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 148


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +3

Query: 783 PXXXPXXXPLVPXPAPDPXX*TKTXPPXISXGXXXPNXKP-PPXPXPXXGXP 935
           P   P   P  P P P P     + PP ++     P   P PP P P    P
Sbjct: 642 PPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 693


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,582,213
Number of Sequences: 237096
Number of extensions: 1036583
Number of successful extensions: 2365
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2093
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)