Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L07
         (915 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P92162 Cluster: Cyclin B homolog; n=2; Obtectomera|Rep:...   349   8e-95
UniRef50_Q5C3G7 Cluster: SJCHGC04386 protein; n=1; Schistosoma j...    34   5.8  
UniRef50_Q2H9L9 Cluster: Putative uncharacterized protein; n=1; ...    34   5.8  

>UniRef50_P92162 Cluster: Cyclin B homolog; n=2; Obtectomera|Rep:
           Cyclin B homolog - Bombyx mori (Silk moth)
          Length = 525

 Score =  349 bits (857), Expect = 8e-95
 Identities = 176/204 (86%), Positives = 181/204 (88%)
 Frame = +2

Query: 209 MEIQLRRHRSAQIQDQENLYAGVRGKGNGAVPTKRLGLTVRGALGDLNTNVQVQREALGK 388
           MEIQLRRHRSAQIQDQENLYAGVRGKGNGAVPTKRLGLTVRGALGDLNTNVQVQREALGK
Sbjct: 1   MEIQLRRHRSAQIQDQENLYAGVRGKGNGAVPTKRLGLTVRGALGDLNTNVQVQREALGK 60

Query: 389 VAVTTAEFEKKATLNRGVVRSNYSHVTSKVDTGLAVKNVIQPSLRPPLRREESTAGLTAR 568
           VAVTTAEFEKKATLNRGVVRSNYSHVTSKVDTGLAVKNVIQPS RPPLRREESTAGLTAR
Sbjct: 61  VAVTTAEFEKKATLNRGVVRSNYSHVTSKVDTGLAVKNVIQPSSRPPLRREESTAGLTAR 120

Query: 569 AVTRTRVALKDNQNKPNEIKESINIYIXXXXXXXXXXXXLPMLKENKELXXSKSHLKDGT 748
           AVTRTRVALKDNQNKPNEIKESINIYI            LPMLKENKEL  SKSHLKDGT
Sbjct: 121 AVTRTRVALKDNQNKPNEIKESINIYIQTKKCQDTKKTKLPMLKENKELRTSKSHLKDGT 180

Query: 749 DSLREXKTSIKXPNRIIRKVKLXE 820
           DSLR+ K ++K P   + K+KL E
Sbjct: 181 DSLRKTKLALKDPIESLGKLKLAE 204


>UniRef50_Q5C3G7 Cluster: SJCHGC04386 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04386 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 308

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +2

Query: 515 SLRPPLRREESTAGLTARAVTRTRVALKDNQNKPN--EIKE--SINIYIXXXXXXXXXXX 682
           SL+  LRR  ST+  T  + + ++V+ +  Q++ N  ++ E  S++  +           
Sbjct: 91  SLKLRLRRVRSTSAFTTVSTSTSQVSKESLQSRTNLSDVDENSSVSRELRRRDKLQRSIS 150

Query: 683 XLPMLKENKELXXSKSHLKDG 745
             P +K+ K L  SKSH KDG
Sbjct: 151 LEPEVKDRKPLERSKSHRKDG 171


>UniRef50_Q2H9L9 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 447

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 452 NYSHVTSKVDTGLAVKNVIQPSLRPPLRREESTAGLTARAVTRTRVALKDNQN 610
           N   VTS V+T LA+     P+LRP  R  +         +  TR    DN N
Sbjct: 251 NVGFVTSAVETNLAIITASAPALRPIFRSRDRGGWFARSVMATTRGGAPDNYN 303


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,039,147
Number of Sequences: 1657284
Number of extensions: 12346925
Number of successful extensions: 25532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25527
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)