Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L06
         (995 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.40 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   4.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   6.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   6.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 630 FFVVNLEF*RVLLYNTYCIF*IFQIPFNAAQCIFQF 523
           +FVV L F  + +Y  YC F IF +      CI+ F
Sbjct: 135 YFVVPLFF-LLCIYYFYCAFIIFTVHLLFLLCIYHF 169


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 330 VLPLCAVCILHER 368
           V+PLC  C LH R
Sbjct: 209 VMPLCKSCDLHHR 221


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 482 GVLQISCQRRYKPRVLFSALNTSPV*SSLDEALFSIP 372
           G L +S   +Y+PR+L    +T+         +F+ P
Sbjct: 135 GQLVLSSMHKYQPRILIVKASTAQALGWAPTNVFTFP 171


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -2

Query: 283 LTTNPA*IHPTIAP-HYQSITTSLPP 209
           L TNPA  HP + P  +Q+ +   PP
Sbjct: 50  LPTNPAFFHPGLLPLAWQANSPPSPP 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,444
Number of Sequences: 336
Number of extensions: 2910
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28340642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)