Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L06
         (995 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0894 - 8797302-8797355,8798393-8799082,8799201-8799315,879...    36   0.050
03_02_0463 - 8673313-8673639,8674040-8674126,8674710-8674790,867...    30   2.5  
02_03_0335 + 17882461-17882527,17882616-17884723                       30   2.5  
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819...    29   7.6  
03_01_0138 - 1089063-1089266,1089590-1089671,1089937-1090390,109...    29   7.6  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    29   7.6  

>08_01_0894 -
           8797302-8797355,8798393-8799082,8799201-8799315,
           8799955-8800082
          Length = 328

 Score = 35.9 bits (79), Expect = 0.050
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +1

Query: 490 ASSPEVEWTSTELKNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQ 669
           A+  E+     ELK AL + +W LE  E  IS+   ++ K+ ++   +  RR F+ A + 
Sbjct: 59  ANLEELSDLQRELKTALGTAKWQLEQFERAISM---SNDKYSLEEGTLARRRQFVVAMED 115

Query: 670 EVKNMKSR 693
           ++  ++ +
Sbjct: 116 QISQVEKQ 123


>03_02_0463 -
           8673313-8673639,8674040-8674126,8674710-8674790,
           8674896-8675048,8675129-8675185,8675293-8675569,
           8675634-8675749,8676372-8676523,8676627-8676816,
           8676935-8677345
          Length = 616

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 338 WQNALQCATAEDLFRGGRTHNKPCLDSPHNSPTLSIYYH 222
           W N  + AT ED F+ G++     L   HNS    I +H
Sbjct: 258 WVNLDRHATTEDAFQDGKSRLNLLLSKVHNSNVFYILFH 296


>02_03_0335 + 17882461-17882527,17882616-17884723
          Length = 724

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 472 CKTPIIASSPEVEWTSTELKNALRSIEWDLEDLEDTISIVEKNSS 606
           C TPI+ +SP  E  S  ++N L  +E  L    D +S +   SS
Sbjct: 526 CSTPILVTSPVGETISNLIRNGLFGVEDALRCCHDCLSALAAASS 570


>07_03_1339 +
           25879246-25881154,25881502-25881696,25881777-25881928,
           25882147-25882607,25883723-25883810,25884066-25884135,
           25884288-25884361,25884456-25884524,25884647-25884724,
           25884946-25885070,25885168-25885240,25885508-25885566,
           25885650-25886027,25886134-25886236,25886332-25886544
          Length = 1348

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 481 PIIASSPEVEWTSTELKNALRSIEWDLEDLEDTI 582
           P++   P  EW  TELK+ LR  +  ++ L+D +
Sbjct: 5   PVLNDRPIDEWKVTELKDELRRRDLSIKGLKDDL 38


>03_01_0138 -
           1089063-1089266,1089590-1089671,1089937-1090390,
           1091094-1091634
          Length = 426

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +1

Query: 478 TPIIASSPEVEWTSTELKNALRSI-EWDLEDLEDTISIVEKNSSKFKIDNKEICDRRTFI 654
           TPIIASSP    T T  +NA  SI E+    +E +   ++ N+ K  +D  +   + T  
Sbjct: 229 TPIIASSPTSSRTPTPQRNAEISIGEFGPNKMEMSEEELQMNTRKEIMDLGQRLGKTTIA 288

Query: 655 EATKQEVKNMKS 690
               +E K+  S
Sbjct: 289 AWASKEEKSTTS 300


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/50 (22%), Positives = 29/50 (58%)
 Frame = +1

Query: 523 ELKNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQE 672
           +L+ + +++  DLE   + IS+++KN+ + ++ N  + +    ++  K E
Sbjct: 737 QLEASFKNLGNDLEQKFEQISVMQKNNEELELANSNLQNELAMVQEQKNE 786


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,840
Number of Sequences: 37544
Number of extensions: 297142
Number of successful extensions: 735
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)