Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L06
         (995 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026208-2|AAB71269.3|  774|Caenorhabditis elegans Prion-like-(q...    33   0.24 
Z81486-5|CAB03987.1|  570|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AL132948-43|CAB61061.2|  511|Caenorhabditis elegans Hypothetical...    30   2.2  
AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z79694-8|CAB01965.1|  872|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z72506-9|CAA96622.1|  872|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p...    29   5.2  
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p...    29   5.2  
X08068-1|CAA30857.1|  882|Caenorhabditis elegans paramyosin prot...    29   5.2  
AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine re...    29   5.2  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    29   6.8  

>AF026208-2|AAB71269.3|  774|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 40
           protein.
          Length = 774

 Score = 33.5 bits (73), Expect = 0.24
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 564 FQIPFNAAQCIFQFSRSPFYFWTTCNYWSLTN 469
           FQ PF+  Q  F ++++PFY   T NYW   N
Sbjct: 437 FQQPFHQQQQQFYYTQAPFYGQQTQNYWGQQN 468


>Z81486-5|CAB03987.1|  570|Caenorhabditis elegans Hypothetical
           protein C53A5.6 protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 529 KNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQEV 675
           K    +IE ++E + DTI++V+   ++    N EI +    +  TKQ V
Sbjct: 225 KTHFNNIEAEMEKISDTIALVKDAGTRLDFLNNEIEEHDRIVFQTKQPV 273


>AL132948-43|CAB61061.2|  511|Caenorhabditis elegans Hypothetical
           protein Y39B6A.41 protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 285 NSQQTLLRFTPQ*PHTINLLPPRCLPSFRVQFWFCHFFYSRTCIAA 148
           N + T+ +FT   P  I +L     P+ R QF F  F +  TC AA
Sbjct: 399 NIRATVSQFTQVPPIGIAVLEVFMFPTLRSQFGFTMFLFLATCCAA 444


>AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical
           protein Y113G7A.3 protein.
          Length = 821

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 231 LLPPRCLPSFRVQFWFCHFFYSRTCIAAQYIAV 133
           +L P C   +R + W C F  +R    A Y A+
Sbjct: 73  ILNPLCAVDYRAKIWMCPFCNNRNPFPAHYAAI 105


>Z79694-8|CAB01965.1|  872|Caenorhabditis elegans Hypothetical
           protein F07A5.7 protein.
          Length = 872

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
 Frame = +1

Query: 469 ICKTPIIASSPEVEWTSTELKNALRS---IEWDLEDLEDTIS-IVEKNSSKFKIDNKEIC 636
           + +  + A S E+E   T L NA+R+    E DLE+    IS ++  N++   I NK   
Sbjct: 601 LAQRKVAALSAELEECKTALDNAIRARKQAEVDLEEANGRISDLISINNNLTSIKNKLET 660

Query: 637 DRRTFIEATKQEVKNMKSRD*RXSR 711
           +  T      +  K + + D R +R
Sbjct: 661 ELSTAQADLDEVTKELHAADERANR 685


>Z72506-9|CAA96622.1|  872|Caenorhabditis elegans Hypothetical
           protein F07A5.7 protein.
          Length = 872

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
 Frame = +1

Query: 469 ICKTPIIASSPEVEWTSTELKNALRS---IEWDLEDLEDTIS-IVEKNSSKFKIDNKEIC 636
           + +  + A S E+E   T L NA+R+    E DLE+    IS ++  N++   I NK   
Sbjct: 601 LAQRKVAALSAELEECKTALDNAIRARKQAEVDLEEANGRISDLISINNNLTSIKNKLET 660

Query: 637 DRRTFIEATKQEVKNMKSRD*RXSR 711
           +  T      +  K + + D R +R
Sbjct: 661 ELSTAQADLDEVTKELHAADERANR 685


>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
            protein T07C4.10 protein.
          Length = 1013

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +1

Query: 502  EVEWTSTELKNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRT 648
            ++E    EL+   R   W L+  ++   I+++N  + + +NK +  +RT
Sbjct: 873  QLEQAQHELEKKKREYMWKLQQKDEFYEIMDRNVKETEKENKRLLRKRT 921


>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
            protein T07C4.10 protein.
          Length = 1013

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +1

Query: 502  EVEWTSTELKNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRT 648
            ++E    EL+   R   W L+  ++   I+++N  + + +NK +  +RT
Sbjct: 873  QLEQAQHELEKKKREYMWKLQQKDEFYEIMDRNVKETEKENKRLLRKRT 921


>X08068-1|CAA30857.1|  882|Caenorhabditis elegans paramyosin
           protein.
          Length = 882

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
 Frame = +1

Query: 469 ICKTPIIASSPEVEWTSTELKNALRS---IEWDLEDLEDTIS-IVEKNSSKFKIDNKEIC 636
           + +  + A S E+E   T L NA+R+    E DLE+    IS ++  N++   I NK   
Sbjct: 617 LAQRKVAALSAELEECKTALDNAIRARKQAEVDLEEANGRISDLISINNNLTSIKNKLET 676

Query: 637 DRRTFIEATKQEVKNMKSRD*RXSR 711
           +  T      +  K + + D R +R
Sbjct: 677 ELSTAQADLDEVTKELHAADERANR 701


>AF038614-2|AAB92061.2|  321|Caenorhabditis elegans Serpentine
           receptor, class v protein4 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -1

Query: 548 MLRSAFFNSVEVHSTSGLLAIIGVLQISCQRRYKPRVLFSALN 420
           + +S+FF  + +H+ + LL  + V  ++  R+Y+   LF A N
Sbjct: 42  VFKSSFFLIIRMHAITDLLMFLYVELVARPRKYRVHNLFEAAN 84


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 523 ELKNALRSIEWD----LEDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQEVKNMK 687
           E+KN +RS   D    +   EDT++ +E    K   + K+    +  +E TK+EV+  K
Sbjct: 683 EVKNVIRSDYTDCLNKVRKAEDTLAKIENKYKKESEEVKKTGKNKDKVEKTKEEVEKAK 741


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,954,683
Number of Sequences: 27780
Number of extensions: 276264
Number of successful extensions: 746
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2605097262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)