Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_L03
(893 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 313 3e-84
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 283 3e-75
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 253 5e-66
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 228 1e-58
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 223 5e-57
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 202 7e-51
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 194 3e-48
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 154 3e-36
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 142 1e-32
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 119 1e-25
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 106 7e-22
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 94 4e-18
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 91 3e-17
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 83 1e-14
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 80 9e-14
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 61 3e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 59 1e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 56 9e-07
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 56 1e-06
UniRef50_Q9HPE9 Cluster: 30S ribosomal protein S8e; n=5; Halobac... 44 0.004
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 42 0.028
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 38 0.46
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 36 1.8
UniRef50_UPI000065DB2D Cluster: Probable histone-lysine N-methyl... 34 4.3
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 9.8
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 9.8
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 313 bits (769), Expect = 3e-84
Identities = 142/190 (74%), Positives = 164/190 (86%)
Frame = +2
Query: 131 RPXASQRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI 310
+P +R LGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRI
Sbjct: 19 KPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRI 78
Query: 311 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIIN 490
IDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+N
Sbjct: 79 IDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILN 138
Query: 491 KKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFY 670
KKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKELEFY
Sbjct: 139 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 198
Query: 671 LRKIKSKRAK 700
LRKIK+++ K
Sbjct: 199 LRKIKARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 283 bits (695), Expect = 3e-75
Identities = 131/185 (70%), Positives = 156/185 (84%), Gaps = 2/185 (1%)
Frame = +2
Query: 146 QRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 325
+R LGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RKTRI DVVY
Sbjct: 24 KRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVY 83
Query: 326 NASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKR 499
NASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKR
Sbjct: 84 NASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKR 143
Query: 500 SQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRK 679
S+K +KYL RQ+ KVE ALE+QF +GR+LAC++SRPGQCGR+DGYILEGKELEFYL+K
Sbjct: 144 SEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKK 203
Query: 680 IKSKR 694
IKSK+
Sbjct: 204 IKSKK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 253 bits (619), Expect = 5e-66
Identities = 125/190 (65%), Positives = 147/190 (77%)
Frame = +2
Query: 131 RPXASQRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI 310
+P +R LGRPAANT++GP+RIH+VR RGG C TRKTRI
Sbjct: 19 KPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRKTRI 58
Query: 311 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIIN 490
IDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+N
Sbjct: 59 IDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILN 118
Query: 491 KKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFY 670
KKRS+K +KY R++ AK+ LEEQF G+LLAC+ASRPGQCGRADGY+LEGKELEFY
Sbjct: 119 KKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFY 178
Query: 671 LRKIKSKRAK 700
LRKIK+++ K
Sbjct: 179 LRKIKARKGK 188
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 228 bits (558), Expect = 1e-58
Identities = 114/194 (58%), Positives = 141/194 (72%), Gaps = 9/194 (4%)
Frame = +2
Query: 146 QRXXXLGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVV 322
+R LGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TRKTRI+DVV
Sbjct: 24 KRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVV 83
Query: 323 YNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEE 478
YNASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E
Sbjct: 84 YNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEA 143
Query: 479 AIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKE 658
A K+S RK R+ ++ +EEQF +GRLLAC++SRPGQCGRADGYILEGKE
Sbjct: 144 AAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKE 203
Query: 659 LEFYLRKIKSKRAK 700
LEFY++K++ K+ K
Sbjct: 204 LEFYMKKLQRKKGK 217
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 223 bits (545), Expect = 5e-57
Identities = 101/131 (77%), Positives = 114/131 (87%)
Frame = +2
Query: 131 RPXASQRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI 310
+P +R LGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRKTRI
Sbjct: 19 KPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRI 78
Query: 311 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIIN 490
IDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+N
Sbjct: 79 IDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILN 138
Query: 491 KKRSQKTARKY 523
KKRS+K +KY
Sbjct: 139 KKRSKKIQKKY 149
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 202 bits (494), Expect = 7e-51
Identities = 104/183 (56%), Positives = 132/183 (72%)
Frame = +2
Query: 146 QRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 325
+R LGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVY
Sbjct: 24 KRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVY 83
Query: 326 NASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQ 505
NAS+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG K +E +A S+
Sbjct: 84 NASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELG-----KSSEDPQA------SE 132
Query: 506 KTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 685
K A A V L +QF +GRLLAC++SRPGQCGR DGY+LEG+EL FY R++
Sbjct: 133 KVA---------ALVPRTLLDQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMD 183
Query: 686 SKR 694
K+
Sbjct: 184 KKK 186
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 194 bits (472), Expect = 3e-48
Identities = 101/191 (52%), Positives = 129/191 (67%), Gaps = 13/191 (6%)
Frame = +2
Query: 161 LGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNN 340
LGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE + R++DVVYNA++N
Sbjct: 29 LGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSN 88
Query: 341 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK 493
ELVRTKTLVKN IV VDA PF++WY HY + L KK K A E A +K
Sbjct: 89 ELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADK 148
Query: 494 ----KRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKEL 661
K S K R++ R+R +VE A+ +Q GR+LA + SRPGQ GRADG +LEG EL
Sbjct: 149 YDVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAEL 208
Query: 662 EFYLRKIKSKR 694
+FYL++++ K+
Sbjct: 209 QFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 154 bits (373), Expect = 3e-36
Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 30/208 (14%)
Frame = +2
Query: 161 LGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNN 340
+GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N
Sbjct: 29 MGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDN 88
Query: 341 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEA-----EEAII------ 487
+ VRT TLVK AI+ +D PFR W+ Y + K E+ E+ ++
Sbjct: 89 DFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEE 148
Query: 488 NKKRS---------------QKTARKYLARQ----RLAKVEGALEEQFHTGRLLACVASR 610
NK+++ KT +K A++ + K + AL E F +GR+LAC++SR
Sbjct: 149 NKEKTIAQQIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSR 208
Query: 611 PGQCGRADGYILEGKELEFYLRKIKSKR 694
PGQ G +GYILEGKEL+FY +KI K+
Sbjct: 209 PGQTGSVEGYILEGKELDFYSKKISDKK 236
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 142 bits (344), Expect = 1e-32
Identities = 67/116 (57%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Frame = +2
Query: 134 PXASQRXXXLGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI 310
P ++ LGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TRKTRI
Sbjct: 117 PLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRI 176
Query: 311 IDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 478
+DVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 177 LDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 119 bits (286), Expect = 1e-25
Identities = 62/120 (51%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = +2
Query: 368 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 526
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 527 ARQRL--AKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 700
RQ L A VE +L+E+F TGRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 106 bits (255), Expect = 7e-22
Identities = 72/182 (39%), Positives = 100/182 (54%)
Frame = +2
Query: 146 QRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 325
+R GR +NT++G + + +R RGG K RAL L GNFS+ S T K +I+ V +
Sbjct: 24 KRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAF 83
Query: 326 NASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQ 505
N S+NELVRT TL K +IV +D + TL K+ AE+ I NK
Sbjct: 84 NESSNELVRTNTLTKGSIVYLDIAKTL----IYNTLIRNLNSNPKI--AEDTISNK---- 133
Query: 506 KTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 685
L +Q +G++LA + SRPGQ GRADGYILEG+EL+++L+KI+
Sbjct: 134 -----------------ILIDQILSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQ 176
Query: 686 SK 691
K
Sbjct: 177 KK 178
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 94.3 bits (224), Expect = 4e-18
Identities = 46/86 (53%), Positives = 55/86 (63%)
Frame = +2
Query: 443 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 622
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 623 GRADGYILEGKELEFYLRKIKSKRAK 700
GRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 124 GRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 91.1 bits (216), Expect = 3e-17
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 9/96 (9%)
Frame = +2
Query: 146 QRXXXLGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 298
+R LGR ANT+L Q+I ++R RGGN K RALRL G+F+WGS +
Sbjct: 24 KRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADISH 83
Query: 299 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFR 406
K RI+ VVYN+++NELVRT TLVK +V +D+ PF+
Sbjct: 84 KARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
Score = 50.8 bits (116), Expect = 5e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 566 EQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 691
+Q +LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 82.6 bits (195), Expect = 1e-14
Identities = 37/87 (42%), Positives = 59/87 (67%)
Frame = +2
Query: 146 QRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 325
+R G ++T++G +++ VR RGGN KY+ALRLD G+F + + R +++ VVY
Sbjct: 24 KRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVY 83
Query: 326 NASNNELVRTKTLVKNAIVVVDATPFR 406
+ S+NELVRT TL K+++V + A PF+
Sbjct: 84 HPSSNELVRTNTLTKSSVVKISAEPFK 110
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +2
Query: 548 VEGALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 691
V+ +L E F G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 79.8 bits (188), Expect = 9e-14
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +2
Query: 146 QRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 319
+R GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 24 KRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 73.7 bits (173), Expect = 6e-12
Identities = 41/82 (50%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 443 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 619
R + + E I K R +K AR KVE ALE+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 620 CGRADGYILEGKELEFYLRKIK 685
GR DGYILEG+EL FY R I+
Sbjct: 119 SGRVDGYILEGEELAFYQRAIR 140
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 61.3 bits (142), Expect = 3e-08
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +2
Query: 341 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 520
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 521 YLARQRLAKVEGALEEQFHTGRLLACVASRPG 616
RQ+ K++ +EEQF +GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +2
Query: 203 IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 382
I R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+
Sbjct: 37 IKMTRVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTII 96
Query: 383 VVDATPF 403
+D+ PF
Sbjct: 97 KIDSMPF 103
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 56.4 bits (130), Expect = 9e-07
Identities = 35/97 (36%), Positives = 52/97 (53%)
Frame = +2
Query: 92 SLASAQGHRWATLRPXASQRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNF 271
S+ G R+ T + ++ +GR A T +G +R VR+ GGN K RALRL+
Sbjct: 7 SVRKPSGGRYHTSQ---GKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATV 63
Query: 272 SWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 382
S + T+KT+I V N+++ VR K L K AI+
Sbjct: 64 SNPATGETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +2
Query: 128 LRPXASQRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTR 307
LRP S+R LGR TRLG + + +RS GGN+K+ LR D N + +TRK +
Sbjct: 17 LRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKTTRKVK 76
Query: 308 IIDVVYNASNNELVRTKTLVKNAIV 382
I V N+++ V+ + + ++
Sbjct: 77 INTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_Q9HPE9 Cluster: 30S ribosomal protein S8e; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S8e -
Halobacterium salinarium (Halobacterium halobium)
Length = 124
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/91 (30%), Positives = 40/91 (43%)
Frame = +2
Query: 122 ATLRPXASQRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 301
A LRP + + LGR T +G R +V RG K R L + N + ++ +
Sbjct: 14 ARLRPRSKKSKSELGREPTETTVGEPRFRTVDVRGDAEKVRVLSTNVVNVA--TDSGAER 71
Query: 302 TRIIDVVYNASNNELVRTKTLVKNAIVVVDA 394
I DV N +N R + K AI+ DA
Sbjct: 72 ATIEDVSANDANPNYARRNIITKGAIIETDA 102
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 41.5 bits (93), Expect = 0.028
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = +2
Query: 122 ATLRPXASQRXXXLGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 301
A R ++R GR A TR+G + + +RG TK RA N + S++
Sbjct: 15 ARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKDNSSKN 74
Query: 302 TRIIDVVYNASNNELVRTKTLVKNAIV 382
++ V+ N +N+ VR + K AIV
Sbjct: 75 VEMLTVLENGANSHFVRRNIITKGAIV 101
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 37.5 bits (83), Expect = 0.46
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +2
Query: 281 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 445
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 446 KKGAKLTEAEEAIINKKRS 502
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +2
Query: 128 LRPXASQRXXXLGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDT-GNFSWGSECSTRK 301
+RP +R +G P T +G +R + R GGN K + L+ T N + +
Sbjct: 17 IRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK-KGLKFATHANVADPETGEVKC 75
Query: 302 TRIIDVVYNASNNELVRTKTLVKNAIV 382
RI +VV N ++ R + K AI+
Sbjct: 76 VRIEEVVKNPASQYYERHGVITKGAII 102
>UniRef50_UPI000065DB2D Cluster: Probable histone-lysine
N-methyltransferase ASH1L (EC 2.1.1.43) (ASH1- like
protein) (Absent small and homeotic disks protein 1
homolog) (huASH1).; n=1; Takifugu rubripes|Rep: Probable
histone-lysine N-methyltransferase ASH1L (EC 2.1.1.43)
(ASH1- like protein) (Absent small and homeotic disks
protein 1 homolog) (huASH1). - Takifugu rubripes
Length = 2057
Score = 34.3 bits (75), Expect = 4.3
Identities = 26/75 (34%), Positives = 32/75 (42%)
Frame = -1
Query: 299 CELNIPIPKRSYRCPDAAHGT*YFHHVNERSGYAEDRAWCLQRDALTXTXADLRMGATXP 120
C L+ P+P SYR P + H HHVN+ RA LQR A T + G P
Sbjct: 925 CCLDAPVPHHSYRAPPSKHS---LHHVNKIL-----RAKKLQRQARTGNNVVKKRGPGRP 976
Query: 119 TGGPALMPVRPDXDP 75
P +P P P
Sbjct: 977 RKHP--LPSPPPSPP 989
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +2
Query: 443 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 613
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 9.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 464 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 574
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 9.8
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 413 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 568
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,186,931
Number of Sequences: 1657284
Number of extensions: 11866071
Number of successful extensions: 33510
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33490
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -