Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_L01
         (1289 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1317 + 26095772-26096191,26096301-26096540,26096647-260967...    29   8.0  

>08_02_1317 +
           26095772-26096191,26096301-26096540,26096647-26096712,
           26096836-26096904,26097004-26097075,26097164-26097382,
           26097480-26097581
          Length = 395

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -2

Query: 763 GRXGXGLFGXDPXAPGSXCGXRSR 692
           G  G GLFG  P APG   G  SR
Sbjct: 76  GGAGAGLFGMPPPAPGDFAGGGSR 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,084,747
Number of Sequences: 37544
Number of extensions: 154535
Number of successful extensions: 236
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)