Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_K21
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0411 - 17725661-17725842,17726066-17726104,17726379-177264...   105   4e-23
03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-53...   104   8e-23
03_06_0698 + 35608666-35608709,35608810-35608958,35609493-356095...    69   5e-12
08_01_0265 + 2148255-2150219,2150735-2150812                           28   8.1  
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344...    28   8.1  

>10_08_0411 -
           17725661-17725842,17726066-17726104,17726379-17726435,
           17726524-17726672,17727195-17727262,17727796-17727798
          Length = 165

 Score =  105 bits (252), Expect = 4e-23
 Identities = 52/99 (52%), Positives = 65/99 (65%)
 Frame = +3

Query: 195 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 374
           MN +KLKK+   VR GGKG+ RRKKK VH T  TDD           VNTIPGIEEVN+ 
Sbjct: 2   MNVDKLKKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIF 61

Query: 375 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLP 491
           K+D  VI F NPK QAS+ ANT+ ++G  + K+  ++LP
Sbjct: 62  KDD-VVIQFLNPKVQASIGANTWVVSGTPQTKKLQDLLP 99


>03_01_0067 -
           538929-539143,539306-539344,539579-539635,539727-539875,
           540298-540365,542009-542093,542185-542246,542612-542700,
           543034-543088,544127-544252,544477-544576,544697-545499
          Length = 615

 Score =  104 bits (250), Expect = 8e-23
 Identities = 51/99 (51%), Positives = 64/99 (64%)
 Frame = +3

Query: 195 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 374
           MN +KLKK+   VR GGKG+ RRKKK VH T  TDD           VN IPGIEEVN+ 
Sbjct: 441 MNVDKLKKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRVGVNNIPGIEEVNIF 500

Query: 375 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLP 491
           K+D  VI F NPK QAS+ ANT+ ++G  + K+  ++LP
Sbjct: 501 KDD-VVIQFQNPKVQASIGANTWVVSGTPQTKKLQDLLP 538


>03_06_0698 +
           35608666-35608709,35608810-35608958,35609493-35609531,
           35610024-35610163,35611130-35611244,35611281-35611399,
           35611413-35611979
          Length = 390

 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 36/61 (59%), Positives = 38/61 (62%)
 Frame = +3

Query: 231 VRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNP 410
           VR GGKGT RRKKK VH T  TDD           VNTIP IEEVN+ K+D  VI F NP
Sbjct: 5   VRTGGKGTVRRKKKAVHKTGTTDDKRLQSTLKRVGVNTIPAIEEVNIFKDD-LVIQFVNP 63

Query: 411 K 413
           K
Sbjct: 64  K 64


>08_01_0265 + 2148255-2150219,2150735-2150812
          Length = 680

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 569 GFGAATLDAILFSRFNPSGPSWLRIXREHL-CGLL 468
           GF AA L  +  S F P   +W R+ R  L CG+L
Sbjct: 132 GFAAAVLWHVESSGFEPGQRAWNRVLRMQLACGML 166


>04_04_0200 -
           23529497-23531938,23532586-23533720,23534272-23534463,
           23535527-23535570
          Length = 1270

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +3

Query: 468 KQTTEMLPGYPQPARTRRVEPTEKDCVECCRAEXLEEXDEVLTSSATLTKP 620
           +QT   +P +         EP+EK C    +   L   +EV ++S+T++ P
Sbjct: 221 RQTEVAVPSWRSKNLDSSREPSEKKCKLVVKVGSLTRTEEVASNSSTVSDP 271


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,625,453
Number of Sequences: 37544
Number of extensions: 310095
Number of successful extensions: 760
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)