Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_K16
(913 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 4e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 6e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.011
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.024
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.17
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.92
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.8
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 8.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 8.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.6 bits (98), Expect = 4e-05
Identities = 26/66 (39%), Positives = 26/66 (39%)
Frame = +1
Query: 469 SAPPRGXGEXXXPPLPXPFFXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPPPPPXXXPP 648
S PP P P P P P PPPPPG G G PPPPPP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPPGVAG--AGPPPPPPP---PP 783
Query: 649 PXGXGG 666
GG
Sbjct: 784 AVSAGG 789
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = +2
Query: 578 PPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXXXPPPP 688
PPP G GPPPPPP PG G PPPP
Sbjct: 752 PPPAPIMG---GPPPPPP-----PPGVAGAGPPPPPP 780
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/64 (28%), Positives = 19/64 (29%), Gaps = 4/64 (6%)
Frame = +2
Query: 506 PPSPXLFFXXXXXXXXXVXPXX----NPPPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXX 673
PP P + V P PPPP G PPPPP G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 674 XPPP 685
P P
Sbjct: 794 APAP 797
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 615 PPPPPPXXXPAXXGXGGXXGXPPPP 689
PPPPPP P G G PPPP
Sbjct: 761 PPPPPP--PPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +2
Query: 614 PPPPPPXXXXRXPGXGGGXXXPPPP-XGGXFPPXXTXGAXPQKKXXXXRPP 763
PPPPPP P PP P GG PP G PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 578 PPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXXXPPPP-XGGXFPP 709
PPP P P P P GG PPPP G PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 757 PPPXXFFLXXXPXGXXGGEXPPXGGGGXPXXPPXPXXAGXXXGGGGGGXXXXPPPP 590
PPP + P PP G P PP P G G G PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP------PGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 575 PPPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXXXPPPP 688
PPPP G G PPPP GG P P
Sbjct: 764 PPPPPGVAGAG----PPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 681 GGXXXPPPSPGXRXXXXGGGGGGPXXXPPXPXGGGGXF 568
GG PPP PG G G P PP GG +
Sbjct: 759 GGPPPPPPPPGVA----GAGPPPPPPPPPAVSAGGSRY 792
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.5 bits (88), Expect = 6e-04
Identities = 26/71 (36%), Positives = 26/71 (36%)
Frame = -3
Query: 686 GGGXXXXPPXPXGGGXXXGGGGGGXPXXXPPXPGGGGGXFXGXXXXXXXXXGXKKGXGRG 507
GGG PP P G G G GG G GGG G F G G G G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG-FGGGLG 252
Query: 506 GXXXSPXPRGG 474
G P GG
Sbjct: 253 GFGGGPGGFGG 263
Score = 36.3 bits (80), Expect = 0.006
Identities = 25/60 (41%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 650 GGGXXXGGGGGGXPXXXPPXPGGGGGXFXGXXXXXXXXXGXKK-GXGRGGXXXSPXPRGG 474
GGG GGG G P PP PGG GG F G G G G GG P GG
Sbjct: 187 GGGFGGFGGGSGGP---PPGPGGFGG-FGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -2
Query: 708 GGNXPPXGGGGXXXPPPSPGXRXXXXGGGGGGPXXXPPXPXGGG-GXFXG 562
GG GGG PPP PG G GG G GGG G F G
Sbjct: 187 GGGFGGFGGGS-GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 708 GGNXPPXGGGGXXXPPPSPGXRXXXXGGGGGGPXXXPPXPXGGGG 574
GG P GG G G GG GGGP P G GG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Score = 29.1 bits (62), Expect = 0.92
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = -3
Query: 830 GGGGGAX*NSPXXPPEFGFXPXXGAAXXKXFFXGXXXXXXXXXXXXPXGGGXXXXPPXPX 651
GG GG S PP G G + G G G P
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGF 247
Query: 650 GGGXXXGGGGGGXPXXXPPXPGGGG 576
GGG GGG G P GG G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -3
Query: 686 GGGXXXXPPXPXGGGXXXGGGG----GGXPXXXPPXPGGGGG 573
G G P GGG GGG GG P PGG GG
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 651 GXRXXXXGGGGGGPXXXPPXPXGGGG 574
G GG GGG PP P G GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGG 209
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = -3
Query: 650 GGGXXXGGGGG--GXPXXXPPXPGGGGGXFXGXXXXXXXXXGXKKGXGRGG 504
G G GG GG G P PGG GG G G G G G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.002
Identities = 33/127 (25%), Positives = 34/127 (26%), Gaps = 5/127 (3%)
Frame = +1
Query: 283 PPPKKXXXXPPXKKXGXXXXPPPXGGXGXPXKKKKXXXGGPPPXKKGXKX---GLCEKXX 453
P PK PP K P P G P K P P G
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPS-GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 454 XXXXXSAPPRGXGEXXXPPLPXPF--FXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPPP 627
APP PP+P P P P P P G PP P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Query: 628 PPXXXPP 648
PP PP
Sbjct: 1212 PPSTAPP 1218
Score = 36.7 bits (81), Expect = 0.005
Identities = 34/136 (25%), Positives = 36/136 (26%), Gaps = 5/136 (3%)
Frame = +1
Query: 259 VEKXQXNXPPPKKXXXXPPXKKXGXXXXPPPXGGXGXPXKKKKXXXGGPPPXKKGX---- 426
V K PP PP K P P G P K P P G
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPS-GAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 427 KXGLCEKXXXXXXXSAPPRGXGEXXXPPLPXPFFXPXXXXXXXXXPXKXPPPP-PGXGGX 603
K + PP PP+P P P P PP P
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Query: 604 XXGXPPPPPPXXXPPP 651
G PP P P PP
Sbjct: 1223 SAGLPPVPVPTAKAPP 1238
Score = 32.7 bits (71), Expect = 0.074
Identities = 24/92 (26%), Positives = 26/92 (28%), Gaps = 2/92 (2%)
Frame = +2
Query: 563 PXXNPPPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXXXPPPPXGGXFP--PXXTXGAXPQ 736
P PP P G PPP P P PP P P P + A P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSS-EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPV 1104
Query: 737 KKXXXXRPPXXXKXQTRGGXXGNFXXPPPPPP 832
K PP + PP P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 32.3 bits (70), Expect = 0.098
Identities = 22/86 (25%), Positives = 25/86 (29%)
Frame = +2
Query: 575 PPPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXXXPPPPXGGXFPPXXTXGAXPQKKXXXX 754
PP P G P P P P G P P P + G P K
Sbjct: 1131 PPVPVPSGAP---PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Query: 755 RPPXXXKXQTRGGXXGNFXXPPPPPP 832
PP + + PP PPP
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 29.9 bits (64), Expect = 0.52
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = +2
Query: 575 PPPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXXXPPPPXGGXFPPXXTXGAXPQKKXXXX 754
PP P G PP PPP P G PPP P + G P
Sbjct: 1179 PPVPKPAAGV---PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Query: 755 RPP 763
PP
Sbjct: 1236 APP 1238
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +1
Query: 505 PPLPXPFFXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPPPPPXXXPPPXG 657
PP+P P P P PPP P P P P P G
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAP-SAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +1
Query: 469 SAPPRGXGEXXXPPLPXPFFXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPPPPPXXXPP 648
S PP P P P P P PP P G PP P P P
Sbjct: 1048 STPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP-----APSGIPPVPKPSVAAP 1102
Query: 649 P 651
P
Sbjct: 1103 P 1103
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.5 bits (78), Expect = 0.011
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 562 PXKXPPPPPGXGGXXXGXPPPPPP 633
P PPPPP G PPPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 562 PXKXPPPPPGXGGXXXGXPPPPPP 633
P PPPPP G PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 574 PPPPPGXGGXXXGXPPPPP 630
PPPPPG PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 614 PPPPPPXXXXRXPGXGGGXXXPPPPXGG 697
PPPPPP PG PPPP G
Sbjct: 9 PPPPPPP-----PGFEPPSQPPPPPPPG 31
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.024
Identities = 24/93 (25%), Positives = 27/93 (29%), Gaps = 3/93 (3%)
Frame = +2
Query: 563 PXXNPPPPXGXGGXXXGPPPPPPXXXXRXPGXGGGXXXPPPPXGGXFPPXXTXGAXPQKK 742
P PPP G PP P P P PP KK
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSR---VSAAALAANKK 309
Query: 743 XXXXRPPXXXKXQTR---GGXXGNFXXPPPPPP 832
PP + + + G N PPPPPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 10/53 (18%)
Frame = +1
Query: 505 PPLPXPFFXPXXXXXXXXXPXKXPPPPP----------GXGGXXXGXPPPPPP 633
PPLP P PPPPP G G PPPPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 29.1 bits (62), Expect = 0.92
Identities = 28/115 (24%), Positives = 29/115 (25%), Gaps = 6/115 (5%)
Frame = +1
Query: 505 PPLPX--PFFXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPPPPPXXXPPPXGXGGXXXS 678
PP+P P P P P PPP G P PP P S
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPS-NGTVSSPPNSPPRPIAPVSMNPAINSTS 288
Query: 679 XXXXXXXXXXXXXXXXXPXKKXXXXAAP----XXGKXPNSGGXXGEFXXAPPPPP 831
KK P GK P G PPPPP
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.1 bits (62), Expect = 0.92
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +1
Query: 475 PPRGXGEXXX---PPLPXPFFXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPPP 627
PP G G PP P P PPPPP G PPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 574 PPPPPGXGGXXXGXPPPPPPXXXPPP 651
PPPPP P PP PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = +2
Query: 581 PPXGXGGXXXG--PPPPPP--XXXXRXPGXGGGXXXPPPP 688
PP G G PPPPPP P G PPPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/81 (27%), Positives = 24/81 (29%), Gaps = 8/81 (9%)
Frame = +2
Query: 614 PPPPPPXXXXRXPGXGGG---XXXPPPPXGGXFPPXXTXGAXPQKKXXXXRPPXXXKXQT 784
PPPPP P G G PPPP + PQ + PP T
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 785 RG-----GXXGNFXXPPPPPP 832
PP PPP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPP 393
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +2
Query: 473 PPXGGXGXGXXPPSPXLFFXXXXXXXXXVXPXXNPPPPXGXGGXXXGPPPPPPXXXXRXP 652
PP G PP P P P P PP PP P
Sbjct: 404 PPLGNASRTSTPPVPT-----PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 653 GXGGGXXXPPPPXGGXFPP 709
G PP P PP
Sbjct: 459 LPAGMPAAPPLPPAAPAPP 477
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 574 PPPPPGXGGXXXGXPPPPPPXXXPPP 651
PPPPP G P PP PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPP 362
Score = 26.2 bits (55), Expect = 6.5
Identities = 31/129 (24%), Positives = 32/129 (24%), Gaps = 6/129 (4%)
Frame = +1
Query: 283 PPPKKXXXXPPXKKXGXXXXPPPXGGXGXPXKKKKXXXGGPPPXKKGXKXGLCEKXXXXX 462
PPP PP PPP + PPP G
Sbjct: 361 PPPP-----PPRSAPSTGRQPPPLSS-----SRAVSNPPAPPPAIPGRSAPALPPLGNAS 410
Query: 463 XXSAPPRGXGEXXXPPLPX------PFFXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPP 624
S PP P P P P P P PP G PP
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAA-PPL 469
Query: 625 PPPXXXPPP 651
PP PPP
Sbjct: 470 PPAAPAPPP 478
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 618 PPPPPXXXPAXXGXGGXXGXPPPPXGGXSPPXKP 719
PP PP A G PP P +PP P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/58 (27%), Positives = 16/58 (27%), Gaps = 6/58 (10%)
Frame = +2
Query: 578 PPPXGXGGXXXGPPPPPPXXXXRXP------GXGGGXXXPPPPXGGXFPPXXTXGAXP 733
PPP PP PPP R G PP P PP P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/64 (34%), Positives = 23/64 (35%)
Frame = -3
Query: 662 PXPXGGGXXXGGGGGGXPXXXPPXPGGGGGXFXGXXXXXXXXXGXKKGXGRGGXXXSPXP 483
P GG GG GG GG GG G G + G RGG S
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR-GGARGGRGGSSGG 63
Query: 482 RGGA 471
RGGA
Sbjct: 64 RGGA 67
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = +3
Query: 615 PPPPP---PXXXPAXXGXGGXXGXPPPPXGGXSPPXKP 719
PPPPP P A G PPPP S P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +1
Query: 505 PPL-PXPFFXPXXXXXXXXXPXKXPPPPPGXGGXXXGXPPPPPP 633
PP+ P P P PPPP G P PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
Frame = +1
Query: 562 PXKXPPPPPGXGGXXX--GXPPPPPPXXXPPP 651
P PP P PPPPP PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +1
Query: 574 PPPPPGXGGXXXGXPPPPP-PXXXPPP 651
PPPPP PP P P PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 9/69 (13%)
Frame = +1
Query: 469 SAPPRGXGEXXXPPLPXPFFXPXXXXXXXXXPXKXPPP---------PPGXGGXXXGXPP 621
SAPPR PP P P P P PPP PP PP
Sbjct: 142 SAPPR----PSIPP-PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 622 PPPPXXXPP 648
PP PP
Sbjct: 197 MPPKVPPPP 205
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +2
Query: 677 PPPPXGGXFPPXXTXGAXPQKKXXXXRPP 763
PPPP +PP + A P + PP
Sbjct: 207 PPPPPQQNYPPAASSSAPPMQYQQTAYPP 235
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 583 PPGXGGXXXGXPPPPPPXXXPPP 651
P G PPPPPP PPP
Sbjct: 295 PSSGDSANGGLPPPPPP---PPP 314
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.151 0.531
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,139,234
Number of Sequences: 5004
Number of extensions: 42574
Number of successful extensions: 456
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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