Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_K14
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 103 2e-22
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 48 1e-05
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 46 4e-05
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 45 7e-05
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 43 3e-04
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 42 9e-04
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 41 0.002
01_01_0062 + 497728-497922,499444-499481,499576-499598,501156-50... 29 4.9
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 103 bits (247), Expect = 2e-22
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 362 ILKKGD-LAKIDLGAHIDGFIAVVAHTVVVGESEVSGRAADVXXXXXXXXXXXXXXXKPG 538
I +KGD + D+G HIDGFIAVVAHT V+ + V+G+AADV +PG
Sbjct: 51 ICEKGDSYIRDDMGCHIDGFIAVVAHTHVIHDGAVTGKAADVLAAANTAAEVALRLVRPG 110
Query: 539 TENYAVTEAIQKISAEYGCKPIEGMLSHQLKQXRIDGEKSIIQNPSEAQRK 691
+N VTEAIQK++A Y CK +EG+LSHQLKQ IDG K ++ + S A K
Sbjct: 111 KKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNK-VVLSVSNADTK 160
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 116 VVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEE 244
VVTKYK A I+N L+ V++ C P A +ICE GD + ++
Sbjct: 20 VVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIRDD 62
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 48.0 bits (109), Expect = 1e-05
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +2
Query: 92 KKRIAEXLVVTKY---KLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFK 262
+KR E L Y + A ++ +V + + + P ++CE LE +
Sbjct: 228 EKRELERLQKPMYNAVRRAAEVHRQVRKHMRSILKPGMLMIDLCE-----TLENMVRKLI 282
Query: 263 KEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 442
KE + GIAF T S+N H++P + + +L+ D+ K+D G HIDG+I A TV
Sbjct: 283 KENGLQAGIAFPTGCSLNWVAAHWTPNSGDKT-VLQYDDVMKLDFGTHIDGYIVDCAFTV 341
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 46.0 bits (104), Expect = 4e-05
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +2
Query: 89 SKKRIAEXLVVTKYKLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFKKE 268
S+ ++ + + + K A ++ RVLE P + EI + K++++
Sbjct: 133 SEIQMHDKVSIIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAY---PS 189
Query: 269 KDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVV 448
G S C SVN CICH P + E L+ GD+ ID+ +++G+ + T +
Sbjct: 190 PLGYGGFPKSVCTSVNECICHGIPDSRE----LQDGDIINIDVTVYLNGYHGDTSKTFLC 245
Query: 449 GE-SEVSGRAADV 484
GE E S R V
Sbjct: 246 GEVDEASKRLVKV 258
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 45.2 bits (102), Expect = 7e-05
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +2
Query: 92 KKRIAEXLVVTKY---KLAGQIVNRVLEQVIAKCVPDASAREICEFGDKLVLEETNKVFK 262
+KR E L Y + A ++ +V + + + P ++CE LE +
Sbjct: 172 EKRELERLQKPMYNAVRRAAEVHRQVRKYMRSILKPGMLMIDLCE-----TLENMVRKLI 226
Query: 263 KEKDSKKGIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTV 442
KE + GIAF T S+N H++P + +L+ D+ K+D G HI+G+I A TV
Sbjct: 227 KENGLEAGIAFPTGCSLNCVAAHWTPNGGDKT-VLQYDDVMKLDFGTHINGYIVDSAFTV 285
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 284 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 463
G S C SVN CICH P +L+ GD+ ID+ +++G+ + T + GE +
Sbjct: 465 GFPKSVCTSVNECICHGIP----DSRVLQNGDIINIDVTVYLNGYHGDTSRTYLCGEVDE 520
Query: 464 S 466
S
Sbjct: 521 S 521
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 284 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 463
G S C S+N C+CH P +++ L+ GD+ +D+ ++G+ + T V GE +
Sbjct: 154 GFPKSICTSLNECVCHGVPDSTQ----LQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDD 209
Query: 464 SGR 472
S R
Sbjct: 210 SIR 212
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/117 (25%), Positives = 48/117 (41%)
Frame = +2
Query: 284 GIAFSTCVSVNNCICHFSPIASEPDYILKKGDLAKIDLGAHIDGFIAVVAHTVVVGESEV 463
G S C SVN CICH P S P L+ GD+ ID+ +++G+ + T + G V
Sbjct: 161 GFPKSVCTSVNECICHGIP-DSRP---LEDGDIINIDVTVYLNGYHGDTSATFLCG--NV 214
Query: 464 SGRAADVXXXXXXXXXXXXXXXKPGTENYAVTEAIQKISAEYGCKPIEGMLSHQLKQ 634
+A + PG E + IQ + ++ + + H + Q
Sbjct: 215 DDKAKKLVQVTRECLDKAISICAPGVEIKRIGRTIQDHADKFKFGVVRQFVGHGVGQ 271
>01_01_0062 +
497728-497922,499444-499481,499576-499598,501156-501262,
501356-501407,501475-501559,501910-502000,502251-502289,
502383-502455,503285-503344,503439-503512,503606-503698,
503779-503880,504048-504128,504352-504426,504486-504614,
504705-504809
Length = 473
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 645 MERRVLYKIHQKHSVKNMKXQHFEKYEVYAMDVLISXGE 761
+ RR LYK ++SV K +HF+ + A D++ S G+
Sbjct: 337 IRRRELYKFCNEYSVPKDKLEHFK--NITAQDIVCSQGD 373
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,709,480
Number of Sequences: 37544
Number of extensions: 352757
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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