Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_K09
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 130 2e-30
AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical ... 31 0.81
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 30 1.9
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 30 1.9
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 30 1.9
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 30 1.9
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 30 1.9
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 30 1.9
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 30 1.9
U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH oxidored... 30 2.5
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical p... 29 5.7
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 130 bits (313), Expect = 2e-30
Identities = 67/136 (49%), Positives = 78/136 (57%)
Frame = +1
Query: 142 HEETDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGC 321
+ ETD RIAIV DRCKPK C CK++CPV R GK CI V I+ ISE LCIGC
Sbjct: 10 NNETDVPLRIAIVEKDRCKPKNCGLACKRACPVNRQGKQCIVVEATSTISQISEILCIGC 69
Query: 322 GICVKKCPFDAITIINIPSNLEKHTXHRLLQKLIQAPSXXYPKXRRSSXSCXAKTVXEKS 501
GICVKKCP+DAI IIN+P+NL T HR Q + P+ + KS
Sbjct: 70 GICVKKCPYDAIKIINLPANLANETTHRYSQNSFKLHRLPTPRCGEVLGLVGTNGIG-KS 128
Query: 502 TGLKILAXXXKXXXGS 549
T LKILA K G+
Sbjct: 129 TALKILAGKQKPNLGN 144
>AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical
protein F52C12.2 protein.
Length = 261
Score = 31.5 bits (68), Expect = 0.81
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Frame = +1
Query: 166 RIAIVNADRCKPKRC--RQECKKS-CPVVRMGK----LCIEVTPNDKIATISEELCIGCG 324
R+A+ + ++C PKRC R+ + + V++G+ L + T +A G
Sbjct: 62 RLAMYDFNQCDPKRCSGRKLLRANLITEVKLGQRFPGLVLSPTGTYTLAPRDRPFVEQNG 121
Query: 325 ICVKKCPFDAITIINIPSNLEKHTXHRLLQKLIQAPSXXYPK 450
+CV C + + P + K HRLL L+ A S Y K
Sbjct: 122 LCVVDCSWKEVE--RTPLHRVKAPEHRLLPYLVAANSVNYGK 161
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 82 CRQYFASVRLLLTEMSRRKDHEETDKLTRIAI--VNADRCKPKRCRQECKKSCPVVRMGK 255
CRQY ++ +++T SR + + + D+ R A+ +N ++CRQ ++ M K
Sbjct: 187 CRQYLSNKFVMMTNESREEMY-DIDRNLRAAMLFINGAPTISQKCRQ-LSQAVACHHMYK 244
Query: 256 LCIEVTPNDKIATISEELC 312
+C E N++I +I + C
Sbjct: 245 VC-ESDSNNQIVSICKHDC 262
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 82 CRQYFASVRLLLTEMSRRKDHEETDKLTRIAI--VNADRCKPKRCRQECKKSCPVVRMGK 255
CRQY ++ +++T SR + + + D+ R A+ +N ++CRQ ++ M K
Sbjct: 213 CRQYLSNKFVMMTNESREEMY-DIDRNLRAAMLFINGAPTISQKCRQ-LSQAVACHHMYK 270
Query: 256 LCIEVTPNDKIATISEELC 312
+C E N++I +I + C
Sbjct: 271 VC-ESDSNNQIVSICKHDC 288
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 82 CRQYFASVRLLLTEMSRRKDHEETDKLTRIAI--VNADRCKPKRCRQECKKSCPVVRMGK 255
CRQY ++ +++T SR + + + D+ R A+ +N ++CRQ ++ M K
Sbjct: 187 CRQYLSNKFVMMTNESREEMY-DIDRNLRAAMLFINGAPTISQKCRQ-LSQAVACHHMYK 244
Query: 256 LCIEVTPNDKIATISEELC 312
+C E N++I +I + C
Sbjct: 245 VC-ESDSNNQIVSICKHDC 262
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 82 CRQYFASVRLLLTEMSRRKDHEETDKLTRIAI--VNADRCKPKRCRQECKKSCPVVRMGK 255
CRQY ++ +++T SR + + + D+ R A+ +N ++CRQ ++ M K
Sbjct: 213 CRQYLSNKFVMMTNESREEMY-DIDRNLRAAMLFINGAPTISQKCRQ-LSQAVACHHMYK 270
Query: 256 LCIEVTPNDKIATISEELC 312
+C E N++I +I + C
Sbjct: 271 VC-ESDSNNQIVSICKHDC 288
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 82 CRQYFASVRLLLTEMSRRKDHEETDKLTRIAI--VNADRCKPKRCRQECKKSCPVVRMGK 255
CRQY ++ +++T SR + + + D+ R A+ +N ++CRQ ++ M K
Sbjct: 54 CRQYLSNKFVMMTNESREEMY-DIDRNLRAAMLFINGAPTISQKCRQ-LSQAVACHHMYK 111
Query: 256 LCIEVTPNDKIATISEELC 312
+C E N++I +I + C
Sbjct: 112 VC-ESDSNNQIVSICKHDC 129
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 82 CRQYFASVRLLLTEMSRRKDHEETDKLTRIAI--VNADRCKPKRCRQECKKSCPVVRMGK 255
CRQY ++ +++T SR + + + D+ R A+ +N ++CRQ ++ M K
Sbjct: 187 CRQYLSNKFVMMTNESREEMY-DIDRNLRAAMLFINGAPTISQKCRQ-LSQAVACHHMYK 244
Query: 256 LCIEVTPNDKIATISEELC 312
+C E N++I +I + C
Sbjct: 245 VC-ESDSNNQIVSICKHDC 262
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 82 CRQYFASVRLLLTEMSRRKDHEETDKLTRIAI--VNADRCKPKRCRQECKKSCPVVRMGK 255
CRQY ++ +++T SR + + + D+ R A+ +N ++CRQ ++ M K
Sbjct: 213 CRQYLSNKFVMMTNESREEMY-DIDRNLRAAMLFINGAPTISQKCRQ-LSQAVACHHMYK 270
Query: 256 LCIEVTPNDKIATISEELC 312
+C E N++I +I + C
Sbjct: 271 VC-ESDSNNQIVSICKHDC 288
>U00037-2|AAA50662.1| 212|Caenorhabditis elegans Hypothetical
protein T20H4.5 protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 301 EELCIGCGICVKKCPFDAITI 363
EE CI C +C CP AITI
Sbjct: 110 EERCIACKLCEAICPAQAITI 130
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 220 CKKSCPVVRMGKLCIEVTPNDKIATISEEL----CIGCGICVKKCPFDAI 357
C+ CP + + E P+ T ++ CI CG+C + CP DAI
Sbjct: 119 CEAICPAQAI-TIEAETRPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 167
>AF140272-1|AAD34863.1| 212|Caenorhabditis elegans NADH
oxidoreductase complex I 23.8kDa subunit protein.
Length = 212
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 301 EELCIGCGICVKKCPFDAITI 363
EE CI C +C CP AITI
Sbjct: 110 EERCIACKLCEAICPAQAITI 130
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 220 CKKSCPVVRMGKLCIEVTPNDKIATISEEL----CIGCGICVKKCPFDAI 357
C+ CP + + E P+ T ++ CI CG+C + CP DAI
Sbjct: 119 CEAICPAQAI-TIEAETRPDGSRRTTRYDIDMTKCIYCGLCQEACPVDAI 167
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical protein
C25F6.3 protein.
Length = 1059
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 166 RIAIVNADRC-KPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGICVKKC 342
++AI++ D C +C C S G I P ++E+ C GC +C C
Sbjct: 955 KVAIIDDDMCINCGKCYMTCNDS------GYQAITFDPVTHQPHVTEDDCTGCTLCYSVC 1008
Query: 343 P 345
P
Sbjct: 1009 P 1009
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 244 RMGKLCIEVTPNDKIATISEELCIGCGICVKKC 342
R+G K+A I +++CI CG C C
Sbjct: 942 RIGPYVTLDNQEQKVAIIDDDMCINCGKCYMTC 974
>Z83116-11|CAM84819.1| 278|Caenorhabditis elegans Hypothetical
protein M01B2.12 protein.
Length = 278
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 70 WTRECRQYFASVRLLLTEMSRRKDHEETDKLTRIAIVNADRCKPK 204
W++E R F S LL +E +K + + I RCKPK
Sbjct: 53 WSKEVRAEFTSAELLELYKKCLNFVKEDNKPSMVEITQLYRCKPK 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,811,939
Number of Sequences: 27780
Number of extensions: 243958
Number of successful extensions: 617
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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