Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_K04
         (868 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   2.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.4  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 737 SCLYWCCQSCG*GYPLALNGKLTG 808
           SC  WCC + G     +  G +TG
Sbjct: 10  SCCCWCCDNLGGPGSSSAGGVVTG 33


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 344 NSNFVTINNKESILNLNTALKTAMGGIILEKI 249
           N+N       E +LN+  + +T   GI  EK+
Sbjct: 476 NNNMAATYMNECLLNIQKSPRTLTLGIFAEKL 507


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +1

Query: 706 VMAVVLNKTSFLPLLVLPKLWVRLSPG----S*WQADWNGI 816
           +MA +L+K  F   L +  LW+  SP     + W   W G+
Sbjct: 641 IMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKGM 681


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,224
Number of Sequences: 438
Number of extensions: 5359
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)