Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_K03
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739...    33   0.23 
07_03_1276 - 25387539-25388317,25388639-25388888                       29   6.5  
11_01_0385 + 2915532-2916482                                           28   8.5  

>01_05_0655 -
           23972488-23973152,23973193-23973241,23973883-23973940,
           23974184-23974215,23975961-23976040,23976509-23977898
          Length = 757

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 180 WTPSRPSHPGPTRPQPHVGAGQRCNAGXPWHK 85
           W   RP   GP+   PH G G     G PWH+
Sbjct: 471 WAVKRPRRSGPSHAPPHAGPGTIAIVG-PWHR 501


>07_03_1276 - 25387539-25388317,25388639-25388888
          Length = 342

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 137 WGRVGPGCDGRDGVQRRRSAS 199
           WG  G G DG DG+++R+ +S
Sbjct: 24  WGDAGKGRDGGDGLKKRKGSS 44


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 183 RWTPSRPSHPGPTRPQPHVGAGQ 115
           +W P  P HP PT   PH G  +
Sbjct: 199 KWPPLPPFHPPPTPAWPHPGGNK 221


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,505,532
Number of Sequences: 37544
Number of extensions: 342287
Number of successful extensions: 880
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)