Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_K01
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0435 + 3092910-3093392,3093938-3094196,3094636-3094979           31   0.99 
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583...    29   4.0  

>06_01_0435 + 3092910-3093392,3093938-3094196,3094636-3094979
          Length = 361

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 238 HWNDLNMEDRKQIREYKKKQWNNV 309
           HW DLN+E++K+ R+  K ++N +
Sbjct: 309 HWGDLNLEEKKRTRKELKAEYNEL 332


>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
            14058450-14058570,14058926-14059320,14059410-14059534,
            14059646-14059876,14060012-14060484,14060587-14060693,
            14060842-14061172,14061222-14061250,14061345-14061901,
            14062170-14062255,14062344-14062406,14062646-14063001,
            14063101-14063356
          Length = 1272

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
 Frame = +1

Query: 172  SNYQNKTQRDLAWEDIC--KRIIPHWNDLNMEDRKQIREYKKKQWNNVRDGYRKYLNRNK 345
            S++ +   + LA    C  KRI P   DLN  D   +      +    RD     L    
Sbjct: 1137 SSFDDSVDQSLAGSSKCNGKRIFPL--DLNTVDAGNVVNISDDEEMPERDAPDFELELTD 1194

Query: 346  NTPVPKKKFIYGDDLQFLLPILKNNKSRERNLPSES 453
            N    K  F       FL P ++ N+S+E +LP++S
Sbjct: 1195 NNSPRKTMF------SFLSPKVEENRSKEHSLPTDS 1224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,687,113
Number of Sequences: 37544
Number of extensions: 273966
Number of successful extensions: 564
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)