Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_K01
         (932 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81457-1|CAB03812.1|  423|Caenorhabditis elegans Hypothetical pr...    52   6e-07
AF036701-6|AAK68607.1|  139|Caenorhabditis elegans Hypothetical ...    33   0.22 
Z81554-3|CAB04505.1|  255|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ...    31   1.6  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    30   2.1  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    30   2.1  
Z81449-3|CAB03761.1|  300|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AC006661-6|AAF39889.1|  312|Caenorhabditis elegans Hypothetical ...    29   3.6  
U41007-12|AAA82272.1|  485|Caenorhabditis elegans Nucleoside tri...    29   4.8  
Z67755-1|CAA91754.1|  254|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z81457-1|CAB03812.1|  423|Caenorhabditis elegans Hypothetical
           protein C01G12.1 protein.
          Length = 423

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
 Frame = +1

Query: 124 LISEVERNPCLWNVGCSNYQNKTQRDLAWEDICKRIIPHWNDLNMEDRKQIREYKKKQWN 303
           LI+EV + PCL+N       +  +R   WE I K I P+             E+ KK+W 
Sbjct: 11  LINEVRKYPCLYNHSRRGSGDTMERQRLWESIAKNIDPNC----------AAEFAKKRWL 60

Query: 304 NVRDGYRKYLN-RNKNTPVPKKKFIYGDDLQFLLPILKNN 420
            +RD YRK L    KN  V   ++ Y + L +L P LK+N
Sbjct: 61  QLRDRYRKELKIAIKNGFVTPVRWCYFNQLSWLDPFLKDN 100


>AF036701-6|AAK68607.1|  139|Caenorhabditis elegans Hypothetical
           protein ZC416.1 protein.
          Length = 139

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
 Frame = +1

Query: 124 LISEVERNPCLWNVGCSNYQNKTQRDLAWEDICKRIIPHWNDLNMEDRKQIREYKKKQWN 303
           LI+EV+  P L++     Y   + R+ AW +I +         N+E      E+ K +W 
Sbjct: 53  LIAEVKARPFLYDQSDEGYNLLSWRNSAWNEIAE---------NLETTS---EHVKTRWK 100

Query: 304 NVRDGYRKYLNRNKNTPVPKK--KFIYGDDLQFLLPILKNNK 423
            +RD Y+K     K   V KK   +++   L+F+   LK+ +
Sbjct: 101 TLRDRYKK---EEKKERVSKKASSWVFQRPLKFIQAHLKDRQ 139


>Z81554-3|CAB04505.1|  255|Caenorhabditis elegans Hypothetical
           protein F57G4.6 protein.
          Length = 255

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
 Frame = +1

Query: 100 VKMXEIXXLISEVERNPCLWNVGCSNYQN--------KTQRDLAW--EDICKRIIPHWND 249
           +K  EI   + EVE+ PCL+++   +Y++        K ++DL +  ED     I  WN 
Sbjct: 32  LKNAEILLFLQEVEQYPCLYDLTDKHYKDREKHDFWIKIEKDLGFLAEDRGSNAIKIWNS 91

Query: 250 LNMEDRKQIREYKKK 294
           L  E    +R  KKK
Sbjct: 92  LKSE---YLRARKKK 103


>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
            protein Y11D7A.14 protein.
          Length = 1464

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
 Frame = +1

Query: 76   RAARAVIIVKMXEIXXLISEVERNPCLWNVGCSNYQNKTQRDLAWEDICKRIIPHWNDLN 255
            +  R  ++ K  E    + E+E+N  ++NV    Y  + ++ +   D+ +        LN
Sbjct: 884  KQGREKLLEKEREFRKTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYERKIEQLN 943

Query: 256  MEDRKQIREYKK-KQWNNVRDGYRKYLNRNKNTPVPKKKFIYGDDLQFLLPILKNNKSRE 432
            ME      E +K ++  N +D +  Y N  K   + K   I  D+LQ  +  L +  + +
Sbjct: 944  MEKTDLENENQKLRETQNRQDSH--YSNLEKEV-MEKSSLI--DELQNQIQKLSDENNEQ 998

Query: 433  R 435
            R
Sbjct: 999  R 999


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 157  WNVGCSNYQNKTQRDLAWEDICKRIIPHWNDLN 255
            + V   NYQNKT+    W+D+  ++  H N L+
Sbjct: 1440 YEVELVNYQNKTRLIKGWDDLFNKLKEHQNSLS 1472


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 157  WNVGCSNYQNKTQRDLAWEDICKRIIPHWNDLN 255
            + V   NYQNKT+    W+D+  ++  H N L+
Sbjct: 1440 YEVELVNYQNKTRLIKGWDDLFNKLKEHQNSLS 1472


>Z81449-3|CAB03761.1|  300|Caenorhabditis elegans Hypothetical
           protein C46F11.3 protein.
          Length = 300

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
 Frame = +1

Query: 70  RPRAARAVIIVKMXEIXXLISEVERNPCLWNVGCSNYQNKTQRDLAWEDICKRIIPHWND 249
           R R +  +   +  ++  +I  V + P LW+     ++N      AW+ +         D
Sbjct: 118 RVRQSTKIDYAEPEKVYDIIYAVRKRPILWDQRLICHRNSNLSRRAWDQL---------D 168

Query: 250 LNMEDRKQIREYKKKQ-WNNVRDGYRKYLNRNKNTPVPKKKFIYGDDLQFLLPIL 411
           L +   ++    ++KQ W + RD +   +N         +K+IY D L+F  P++
Sbjct: 169 LELGIDEEYPLARRKQIWKSKRDYFVSAVN-----AANLRKWIYADALEFYRPMI 218


>AC006661-6|AAF39889.1|  312|Caenorhabditis elegans Hypothetical
           protein H20J04.3 protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 124 LISEVERNPCLWNVGCSNYQNKTQRDLAWEDICKRI 231
           LI EV R+PCL++V    Y++   R  AW  I  ++
Sbjct: 123 LILEVRRHPCLYDVRDPKYRHGDCRTQAWGMIIDKL 158


>U41007-12|AAA82272.1|  485|Caenorhabditis elegans Nucleoside
           triphosphatase protein 1 protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 7/19 (36%), Positives = 17/19 (89%)
 Frame = +1

Query: 271 QIREYKKKQWNNVRDGYRK 327
           ++R+Y +K WN+++DG+++
Sbjct: 342 EVRKYCQKDWNDIQDGFKR 360


>Z67755-1|CAA91754.1|  254|Caenorhabditis elegans Hypothetical
           protein F54F7.1 protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +1

Query: 172 SNYQNKTQRDLAWEDICKRIIPHWNDLNMEDRKQIREYKKKQ 297
           +N Q+KT R LA E + +   PH     M++ K+ R  KKK+
Sbjct: 143 TNVQSKTARQLAKEKVKEYHYPHGITPPMKNAKKRRFRKKKE 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,205,470
Number of Sequences: 27780
Number of extensions: 269502
Number of successful extensions: 734
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)