Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_J15
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0447 + 17688248-17688319,17688414-17688515,17688852-176889...    39   0.006
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557...    30   2.8  
11_01_0728 + 6023361-6023495,6024880-6025212,6025306-6025361,602...    29   3.8  
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101...    29   6.6  
07_03_1421 - 26451012-26451155,26451256-26451322,26451605-264516...    28   8.7  

>09_04_0447 +
           17688248-17688319,17688414-17688515,17688852-17688981,
           17689198-17689290,17689363-17689451,17689889-17689969,
           17690118-17690207,17690653-17690772,17690877-17690927,
           17691125-17691171,17691321-17691378,17691451-17691507
          Length = 329

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 26/97 (26%), Positives = 49/97 (50%)
 Frame = +2

Query: 245 KLLIEGKTKQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEILKS 424
           +L  +GK + V++  +   + +L+  DR +A D V A  +  K  + N+T+   F+  + 
Sbjct: 18  RLAAKGKVRDVYESGE---HLVLVTTDRQSAFDRVLA-SIPFKGQVLNETSLWWFDRTRH 73

Query: 425 AGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGS 535
                A V    +   ++K+C + P+E+V R   TGS
Sbjct: 74  I-TPNAVVSSPDKNVTIAKRCSVFPVEFVVRGYVTGS 109


>03_05_0434 +
           24252994-24253449,24254791-24254877,24255450-24255748,
           24256146-24256383,24256907-24257441,24257527-24257729,
           24258311-24258520
          Length = 675

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +2

Query: 44  WFERSSSTWY-YFNCCSFAGNL 106
           WF R +S W+  F CC+F G L
Sbjct: 552 WFGRKASMWFMLFTCCAFIGPL 573


>11_01_0728 +
           6023361-6023495,6024880-6025212,6025306-6025361,
           6025526-6025684,6025790-6025889,6026481-6026623,
           6026728-6026833,6027139-6027277,6027363-6027631,
           6027734-6027820
          Length = 508

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 787 FMSISAQSRRAQAFSKISNIRIVAFXM*STSSRPIRR-PL*LNLAEMICSSDHWGS 623
           F+SISA+ R A A  ++  ++ + +   S      R+ PL ++  ++ CS D W +
Sbjct: 122 FLSISAEFRSAPAMGELGALQSIVYHRGSLRLLDQRKLPLEVDYIDVKCSGDGWNA 177


>07_01_0139 -
           1014952-1015165,1015271-1015350,1015420-1015629,
           1015925-1016044,1016650-1016709,1017129-1017204,
           1018189-1018352,1018428-1018490,1018815-1018902,
           1018997-1019647,1019965-1020449
          Length = 736

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +2

Query: 146 RDPHRIGSSLHSYLRSKIAKMSHPKQVGQYKLGKLLIEGKTKQVFDVPD-QPGYCLLLNK 322
           R P  I S   S +     K+  P   GQ++ G+LL  G    V++  + Q G    + +
Sbjct: 330 RPPGAINSMQTSIVNQSAPKVEMPSVAGQWQKGRLLGSGTFGCVYEATNRQTGALCAMKE 389

Query: 323 DRITAGDGVKAHDLE 367
             I   D   A  L+
Sbjct: 390 VNIIPDDAKSAESLK 404


>07_03_1421 -
           26451012-26451155,26451256-26451322,26451605-26451657,
           26451736-26451806,26453340-26453482,26453858-26453919,
           26454008-26454100,26454203-26454314,26454432-26454547,
           26454625-26454787,26454829-26455349,26455429-26455528,
           26457472-26457552,26457666-26457877
          Length = 645

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 242 GKLLIEGKT-KQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEG 370
           G  L+ G+T K+  +V ++   CL LN  R   GD VK +   G
Sbjct: 349 GTSLVNGETQKKAEEVLEEVLLCLTLNNLRADRGDNVKENSCHG 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,132,289
Number of Sequences: 37544
Number of extensions: 490433
Number of successful extensions: 1107
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)