Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_J15
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical pr...   137   1e-32
AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical...    30   1.9  
AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical ...    30   2.6  
U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    29   4.5  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        29   4.5  

>U39848-3|AAA80690.1|  423|Caenorhabditis elegans Hypothetical
           protein B0286.3 protein.
          Length = 423

 Score =  137 bits (331), Expect = 1e-32
 Identities = 63/115 (54%), Positives = 86/115 (74%)
 Frame = +2

Query: 245 KLLIEGKTKQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEILKS 424
           +LL EGKTKQ+FD+  +  Y L+ +KD +TA + V+ ++LEGK+ I+++T + VFE L+ 
Sbjct: 15  ELLAEGKTKQIFDIKGEKDYVLIRSKDSLTAFNAVRKNELEGKSRIASKTTSNVFEYLQL 74

Query: 425 AGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRVHSSK 589
            G+ T F K  SET F+++KC MIPIEWV RR+ATGSFLKRNPGV EGFR +  K
Sbjct: 75  LGLPTHFEKSISETEFVARKCTMIPIEWVARRVATGSFLKRNPGVKEGFRFNDLK 129



 Score =  115 bits (276), Expect = 5e-26
 Identities = 55/95 (57%), Positives = 66/95 (69%)
 Frame = +3

Query: 576 FTPPKQETFFKDDANHDPQWSEEQIISAKFNYNGLLIGRDEVDYMXKATILIFEILEKAW 755
           F   K ETFFKDDAN DPQW++EQI+S     + L IGR+E+  M K T L+F  LEK W
Sbjct: 125 FNDLKLETFFKDDANDDPQWTDEQIVSNGLMIDHLKIGREEISLMKKMTKLVFRALEKGW 184

Query: 756 ALRDCALIDMKIXXXXDXEGSIVLADVIDSDSWRL 860
           AL + ALIDMKI      EG I+LADVID+DSWR+
Sbjct: 185 ALSNSALIDMKIEFGVTVEGEILLADVIDNDSWRV 219


>AC024790-14|ABA61861.1|  417|Caenorhabditis elegans Hypothetical
           protein Y47D7A.16 protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -2

Query: 405 TFAFV*LEIAAFPSKSWALTPSPAVILSLLRSKQYPGWS 289
           TF F    +A F S SW  T S  + LSLL +K   GW+
Sbjct: 3   TFLFTFCLVAIFGSSSWIGTNSVWMELSLLTAKLPEGWN 41


>AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical
           protein C17B7.8 protein.
          Length = 558

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
 Frame = +3

Query: 69  GTTLTVAPLLVIYNL*KALIATYIRRAIPTVLEARFIPTCARKLQK-------CLILNKL 227
           GT +T+  +L  YNL    +A  +    PTV    F+ T     +K          + KL
Sbjct: 61  GTYITLDQILSPYNLTMWYMAVKLMDT-PTVGSEHFVETSREYAKKKNNSERFSFAVEKL 119

Query: 228 DNINWANFSLRVRPNRYSMFRTNLGTACFLT 320
           +NIN  N   +    R+S F  NL    + T
Sbjct: 120 ENINLTNKFKKFFEKRFSKFNCNLAQNLYST 150


>U40061-4|AAA81151.3|  239|Caenorhabditis elegans Hypothetical
           protein ZK563.5 protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 341 DGVKAHDLEGKAAISNQTNAKVFEILKSAGIKTAFVKIASETAFLSKKC 487
           D +  HD++   A+    NA+VF  L + GIK A    AS       +C
Sbjct: 51  DAIDKHDVDTLCAMWESWNARVFHSLDTEGIKQAQCYEASAYRLFLVRC 99


>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
            protein F43G9.6 protein.
          Length = 2034

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 491  MIPIEWVTRRLATGSFLKRNPGVPE 565
            M+P++W +R  A+ S   R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 491  MIPIEWVTRRLATGSFLKRNPGVPE 565
            M+P++W +R  A+ S   R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,598,916
Number of Sequences: 27780
Number of extensions: 420725
Number of successful extensions: 979
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)