Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_J14
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 81 8e-16
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 74 2e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 65 7e-11
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 55 8e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 53 2e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 53 2e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 53 2e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 53 3e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 52 6e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 44 1e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 44 1e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 44 1e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 44 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 44 2e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 42 6e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 39 0.004
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 39 0.004
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 39 0.004
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 39 0.006
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 39 0.006
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 37 0.017
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 37 0.017
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 36 0.039
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 36 0.039
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 35 0.068
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 35 0.068
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 33 0.36
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 33 0.36
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.36
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 31 1.5
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 31 1.5
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 30 1.9
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 30 1.9
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 3.4
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.5
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 29 5.9
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 29 5.9
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 28 7.8
CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 28 7.8
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 81.4 bits (192), Expect = 8e-16
Identities = 36/104 (34%), Positives = 64/104 (61%)
Frame = +1
Query: 310 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 489
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 490 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
P + + + +++PT IQ+ WPIAMSG++++ +A+TG K
Sbjct: 137 LPGQIHE-LLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGK 179
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +2
Query: 698 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 808
LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASK 242
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 609 GSGKTLAYILPAIVHINNQPPIRRGDG 689
GSGKTLA++LPA+VHI Q +RG+G
Sbjct: 176 GSGKTLAFMLPALVHITKQAHRQRGEG 202
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 73.7 bits (173), Expect = 2e-13
Identities = 32/100 (32%), Positives = 56/100 (56%)
Frame = +1
Query: 322 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 501
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 502 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
+ + ++ Y++PTPIQA P A+SG++++G+A+TG K
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGK 315
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 609 GSGKTLAYILPAIVHINNQPPIRRGDG 689
GSGKT AY+ PAIVHI +QP ++ G+G
Sbjct: 312 GSGKTAAYLWPAIVHIMDQPDLKAGEG 338
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 692 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 814
+A+++ PTRELA Q+ Q A F + C +GG K E
Sbjct: 340 VAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWE 380
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +1
Query: 415 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 594
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 595 GVAQTGPAK 621
GVA+TG K
Sbjct: 343 GVAETGSGK 351
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 814
A+++APTRELAQQI++ FG ++ V GGA + +
Sbjct: 381 AIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASRED 420
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 609 GSGKTLAYILPAIVHINNQPPIRRGDGR 692
GSGKT A++LP +V I + P + R + R
Sbjct: 348 GSGKTAAFLLPLLVWITSLPKMERQEHR 375
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 64.9 bits (151), Expect = 7e-11
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +1
Query: 310 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 486
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 487 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
+ +K Y +PT IQAQ P MSG++++G+A+TG K
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGK 354
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 609 GSGKTLAYILPAIVHINNQPPIRRGDG 689
GSGKTLA++LP HI +QP + GDG
Sbjct: 351 GSGKTLAFLLPMFRHILDQPELEEGDG 377
Score = 34.7 bits (76), Expect = 0.090
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 692 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
IA++LAPTRELA Q + A F ++ C +GG
Sbjct: 379 IAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGG 414
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 54.8 bits (126), Expect = 8e-08
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 433 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 612
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 613 PAK 621
K
Sbjct: 214 SGK 216
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
ALVL+PTREL+ QI + F + + + + ++GG
Sbjct: 253 ALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +1
Query: 409 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 588
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 589 LVGVAQTGPAK 621
L+ AQTG K
Sbjct: 179 LMSCAQTGSGK 189
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
ALVL+PTRELA QI + A F + S ++ ++GG
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +1
Query: 409 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 588
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 589 LVGVAQTGPAK 621
L+ AQTG K
Sbjct: 163 LMSCAQTGSGK 173
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
ALVL+PTRELA QI + A F + S ++ ++GG
Sbjct: 209 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +1
Query: 409 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 588
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 589 LVGVAQTGPAK 621
L+ AQTG K
Sbjct: 160 LMSCAQTGSGK 170
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
ALVL+PTRELA QI + A F + S ++ ++GG
Sbjct: 206 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 240
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 370 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 546
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 547 IQAQGWPIAMSGKNLVGVAQTGPAK 621
IQ QG P+A+SG++++G+A TG K
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGK 240
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +1
Query: 442 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPA 618
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 619 K 621
K
Sbjct: 134 K 134
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 629 LHLASNCAHK*PTAYSER*WSIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 808
LH+ + A ++ LVL+PTRELAQQI+ + + Y ++ C++GG +
Sbjct: 144 LHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSR 202
Query: 809 RE 814
E
Sbjct: 203 PE 204
Score = 34.7 bits (76), Expect = 0.090
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 600 SPNGSGKTLAYILPAIVHINNQ 665
S GSGKTLA++LPA++HI+ Q
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQ 149
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 463 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTG K
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 698 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
++L PTRELA QI F + + + V+GG
Sbjct: 422 IILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 463 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTG K
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 698 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
++L PTRELA QI F + + + V+GG
Sbjct: 422 IILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 463 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTG K
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGK 391
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 698 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
++L PTRELA QI F + + + V+GG
Sbjct: 422 IILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 463 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTG K
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 698 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
++L PTRELA QI F + S + V+GG
Sbjct: 379 IILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 463 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTG K
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGK 348
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 698 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
++L PTRELA QI F + S + V+GG
Sbjct: 379 IILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
FE+ N + + GY +PTPIQ P+A++GK++ A TG K
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGK 198
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
F EAN + +++ V GY + TPIQ P+ G +++ AQTG K
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
F EAN + +++ V GY + TPIQ P+ G +++ AQTG K
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
F EAN + +++ V GY + TPIQ P+ G +++ AQTG K
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGK 602
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 457 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TG K
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
AL+++PTRELA Q +V + G + +R C+ GG
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 457 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TG K
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGK 74
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
AL+++PTRELA Q +V + G + +R C+ GG
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 814
ALV+APTRELAQQIQ+V + G V GG R+
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/52 (23%), Positives = 30/52 (57%)
Frame = +1
Query: 466 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G K
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 814
ALV+APTRELAQQIQ+V + G V GG R+
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/52 (23%), Positives = 30/52 (57%)
Frame = +1
Query: 466 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G K
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
F + ++ Q ++TM K TP+QA P + G +++G A+TG K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
AL+L PTRELA QI + G ++ + + GG
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
F + ++ Q ++TM K TP+QA P + G +++G A+TG K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGK 139
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
AL+L PTRELA QI + G ++ + + GG
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 35.1 bits (77), Expect = 0.068
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
F E + + +G+ +P+ IQ P A+ GK+++G+A+TG K
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGK 94
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 35.1 bits (77), Expect = 0.068
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 493 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGPAK 621
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TG K
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGK 206
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
AL+L+PTRELA QIQ+V G V+ GG
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 799
AL+L+PTRELA QIQ+V G V+ GG
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 508 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
+G+K Y +PT IQ +++G ++VG A+TG K
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGK 126
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.64
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 600 SPNGSGKTLAYILPAIVHINNQP 668
+P GSGKT+ Y+LP + + ++P
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP 185
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 600 SPNGSGKTLAYILPAIVHINN 662
SP GSGKTLA++LP + I N
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQN 73
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +1
Query: 412 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 591
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 592 VGVAQTGPAK 621
V A TG K
Sbjct: 777 VACAHTGSGK 786
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +1
Query: 412 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 591
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 592 VGVAQTGPAK 621
V A TG K
Sbjct: 777 VACAHTGSGK 786
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
FE + +K + P+P+QA+ P+ + G++++ A++G K
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGK 72
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
FE + +K + P+P+QA+ P+ + G++++ A++G K
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGK 72
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 603 PNGSGKTLAYILPAIVH 653
P G+GK+L Y LPA+VH
Sbjct: 202 PTGAGKSLCYQLPAVVH 218
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 176 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 292
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 588 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 409
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 408 D 406
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 588 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 409
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 408 D 406
+
Sbjct: 86 N 86
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 692 IALVLAPTRELAQQIQQ 742
+AL+LAPTRELA QI +
Sbjct: 461 LALILAPTRELAAQIHE 477
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 231 RRIIAEFVASSKFGTTVSTAIIPV 160
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 231 RRIIAEFVASSKFGTTVSTAIIPV 160
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = +1
Query: 475 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGPAK 621
F + + + + + +G+++ +Q +A+ KN++G A+TG K
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGK 139
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 50 WLFFHRAAVVKVDPASERIHSLNKHLQLNPKNNHV-LVTGIIAVE 181
W A + PAS ++H L++ LQLN N+ L ++ +E
Sbjct: 760 WTLLAEAKRLAEQPASHQLHCLSRALQLNKANDSAWLKVAVLCLE 804
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 600 SPNGSGKTLAYILPAIVHI 656
+P GSGKTLA+ LP I I
Sbjct: 170 APTGSGKTLAFALPVIDEI 188
>CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical
protein C50E10.1 protein.
Length = 122
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = -1
Query: 749 QQLAEFVVLTLW*APRPKQSTITSPNRRLVIYVHNCWQDVGQRFAGPVWATPTK 588
+Q+A F + P ++ TSP + NCW +V W +P +
Sbjct: 52 EQMASFWNIPSPNPPATSATSSTSPEEEIPCICFNCWGNVAAAANSKTWKSPNQ 105
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 695 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 814
A+V+ PTRELA Q Q+ + ++ GG R+
Sbjct: 114 AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRD 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,427,444
Number of Sequences: 27780
Number of extensions: 425851
Number of successful extensions: 1356
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -