Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_J07
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 115 5e-26
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 115 5e-26
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 101 5e-22
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 92 6e-19
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 66 3e-11
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 43 3e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 43 3e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 43 3e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U80840-13|AAB37936.2| 182|Caenorhabditis elegans Hypothetical p... 30 2.6
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 7.8
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 115 bits (276), Expect = 5e-26
Identities = 57/107 (53%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +1
Query: 328 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 507
QGD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 50 QGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKS 108
Query: 508 ETFQTVDLWERQNLNSVVICLQSLGRKA-GTYGKPSIGPKEAEXNVR 645
E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKEA+ + R
Sbjct: 109 ELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRR 155
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +3
Query: 195 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGGYGQLLR 353
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T G L++
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVK 58
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 650 FSEEXLRAGQGVISLXYGSNKGANXXGIQL 739
+++E L+AG VI L GSNKGA G+ +
Sbjct: 157 WTDEQLKAGHNVIGLQMGSNKGATASGLNM 186
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 115 bits (276), Expect = 5e-26
Identities = 57/107 (53%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +1
Query: 328 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 507
QGD DN +V +DG+LLC LAN++ P +KK+NTS+MAFK MENI+ FL+ A + V
Sbjct: 50 QGDADNLVKVFQDGSLLCTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKS 108
Query: 508 ETFQTVDLWERQNLNSVVICLQSLGRKA-GTYGKPSIGPKEAEXNVR 645
E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKEA+ + R
Sbjct: 109 ELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKEAQGDRR 155
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +3
Query: 195 ANNRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSGGYGQLLR 353
+++RA KSG A EAQ+KI KY + LA E L+W++ +TG+ +T G L++
Sbjct: 6 SSDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVK 58
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 650 FSEEXLRAGQGVISLXYGSNKGANXXGIQL 739
+++E L+AG VI L GSNKGA G+ +
Sbjct: 157 WTDEQLKAGHNVIGLQMGSNKGATASGLNM 186
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 101 bits (243), Expect = 5e-22
Identities = 50/92 (54%), Positives = 63/92 (68%)
Frame = +1
Query: 331 GDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQE 510
G+ DNF+ +LKDGTLLCK AN I IKK+ F CMENINAF+E A++ GVP +E
Sbjct: 46 GERDNFHNLLKDGTLLCKAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEE 105
Query: 511 TFQTVDLWERQNLNSVVICLQSLGRKAGTYGK 606
TFQ+V+L E ++L SV + L SLGR GK
Sbjct: 106 TFQSVELVEGRDLFSVCVTLLSLGRVLQKAGK 137
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 201 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGEPENTSG 332
NR T G ++K +SK+ ++ A LEWI+ ++GE +TSG
Sbjct: 3 NRTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSG 46
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 91.9 bits (218), Expect = 6e-19
Identities = 47/92 (51%), Positives = 57/92 (61%)
Frame = +1
Query: 328 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQ 507
+ DNF E LKDG LCKL N I +KKI F C+ENIN F AAR LGV +
Sbjct: 48 EASRDNFREQLKDGQRLCKLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDE 107
Query: 508 ETFQTVDLWERQNLNSVVICLQSLGRKAGTYG 603
ETFQ+VDL++ ++L SV + LQSL RK G
Sbjct: 108 ETFQSVDLFDGRDLFSVTVTLQSLARKVEKLG 139
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 355 VLKDGTLLCKLANNIHPNMIKKINTS-SMAFKCMENINAFLEAARQLGVPAQETFQTVDL 531
+LKDG +LCKL + P+ N MAF MENI+ FL AA+Q GV FQTVDL
Sbjct: 58 LLKDGVMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDL 117
Query: 532 WERQNLNSVVICLQSLGRKA 591
+E + V+ CL+ L A
Sbjct: 118 YENKQCYKVIECLRLLAAVA 137
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 201 NRATKSGFAAEAQRKINSKYSEELAHESLEWIRMITGE 314
N G + E Q+K ++++ E A E L+WI +TGE
Sbjct: 3 NHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGE 40
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 650 FSEEXLRAGQGVISLXYGSNKGANXXGIQLW*XEKHVK 763
F E +R G+ VI L YG+NK A+ G+ + + +K
Sbjct: 161 FPEAVMRRGEMVIPLQYGTNKCASQKGMSPYGLPRQIK 198
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 331 GDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 495
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 27 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 86
Query: 496 VPAQETFQTVDLWERQNLNSVVICLQSL 579
+ + F DL+ V+ L L
Sbjct: 87 LEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 331 GDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 495
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 59 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 118
Query: 496 VPAQETFQTVDLWERQNLNSVVICLQSL 579
+ + F DL+ V+ L L
Sbjct: 119 LEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 331 GDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAF-LEAARQLG 495
G M F VL+DG LLC+LAN + PN I KKI ++ F C NIN F +
Sbjct: 59 GTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFN 118
Query: 496 VPAQETFQTVDLWERQNLNSVVICLQSL 579
+ + F DL+ V+ L L
Sbjct: 119 LEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +1
Query: 328 QGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINT--SSMA-FKCMENINAFLEAARQLGV 498
+GD+ +F L DG LCK N +HP I ++ SS+A + N++ FL+ R++GV
Sbjct: 539 KGDI-SFSLQLSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGV 597
Query: 499 PAQETFQTVDLWERQNLNSV 558
P +D+ ++N V
Sbjct: 598 PETTLCSQMDIISKRNPQKV 617
>U80840-13|AAB37936.2| 182|Caenorhabditis elegans Hypothetical
protein F08D12.13 protein.
Length = 182
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 303 ITGEPENTSGGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQ 425
+ G P+ +SG +GQ+ S ++H ++ + PP++ + Q
Sbjct: 110 VGGMPQQSSGSFGQMPSSGSQQHEALCKTNSLPPQYMSQQQ 150
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 351 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVYGEYQRFPRSRKTVGCTGTGNFSNCRP 530
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 531 VGETESQLRR--DLLAVTG 581
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 351 RSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVYGEYQRFPRSRKTVGCTGTGNFSNCRP 530
R A R+ + + + PP + D GE+Q P SR T + + + P
Sbjct: 473 RPADRQSAVIPTLRGKPPAVPDSQRSGYDSSGNVGEHQSRPSSRTTSSSQRSSDAHSEEP 532
Query: 531 VGETESQLRR--DLLAVTG 581
+G S RR + +TG
Sbjct: 533 IGRNSSGARRAPEAFTITG 551
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,690,869
Number of Sequences: 27780
Number of extensions: 398060
Number of successful extensions: 1011
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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