Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_J05
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 153 1e-37
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 153 1e-37
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 153 1e-37
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 7.5
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 28 7.5
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 153 bits (372), Expect = 1e-37
Identities = 85/152 (55%), Positives = 102/152 (67%)
Frame = +2
Query: 203 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 382
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 383 IETLIELGAEVQWSSSNIYSTQDXAAAALVCRXNTPSMPSREKLMTSIFGCIXXXLDLXX 562
IETL LGAEVQWSS NI+STQD AAAA + + P + + CI + +
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAA-IAQTGVPVYAWKGETDEEYEWCIEQTI-VFK 122
Query: 563 XEKPLNMILDDXG*LXXT*STLKYPDLLKDVK 658
+PLNMILDD G L KYP L ++
Sbjct: 123 DGQPLNMILDDGGDLTNL-VHAKYPQYLAGIR 153
Score = 93.5 bits (222), Expect = 2e-19
Identities = 58/114 (50%), Positives = 62/114 (54%)
Frame = +1
Query: 487 PIYAFKGETDDEYIWVYXXKXGSXXDXKASQYDLG*XGVTXXNLVHP*VPXXXXXXXXXX 666
P+YA+KGETD+EY W D + L G NLVH P
Sbjct: 99 PVYAWKGETDEEYEWCIEQTI-VFKDGQPLNMILD-DGGDLTNLVHAKYPQYLAGIRGLS 156
Query: 667 XXXXXPGVHNLXXMFRXXLLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRAT 828
GVHNL M LKVPAINVNDSVTKSKFDNLYG RESL DGIKRAT
Sbjct: 157 EETTT-GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDGIKRAT 209
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 153 bits (372), Expect = 1e-37
Identities = 85/152 (55%), Positives = 102/152 (67%)
Frame = +2
Query: 203 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 382
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 383 IETLIELGAEVQWSSSNIYSTQDXAAAALVCRXNTPSMPSREKLMTSIFGCIXXXLDLXX 562
IETL LGAEVQWSS NI+STQD AAAA + + P + + CI + +
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAA-IAQTGVPVYAWKGETDEEYEWCIEQTI-VFK 122
Query: 563 XEKPLNMILDDXG*LXXT*STLKYPDLLKDVK 658
+PLNMILDD G L KYP L ++
Sbjct: 123 DGQPLNMILDDGGDLTNL-VHAKYPQYLAGIR 153
Score = 93.5 bits (222), Expect = 2e-19
Identities = 58/114 (50%), Positives = 62/114 (54%)
Frame = +1
Query: 487 PIYAFKGETDDEYIWVYXXKXGSXXDXKASQYDLG*XGVTXXNLVHP*VPXXXXXXXXXX 666
P+YA+KGETD+EY W D + L G NLVH P
Sbjct: 99 PVYAWKGETDEEYEWCIEQTI-VFKDGQPLNMILD-DGGDLTNLVHAKYPQYLAGIRGLS 156
Query: 667 XXXXXPGVHNLXXMFRXXLLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRAT 828
GVHNL M LKVPAINVNDSVTKSKFDNLYG RESL DGIKRAT
Sbjct: 157 EETTT-GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDGIKRAT 209
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 153 bits (372), Expect = 1e-37
Identities = 85/152 (55%), Positives = 102/152 (67%)
Frame = +2
Query: 203 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 382
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 383 IETLIELGAEVQWSSSNIYSTQDXAAAALVCRXNTPSMPSREKLMTSIFGCIXXXLDLXX 562
IETL LGAEVQWSS NI+STQD AAAA + + P + + CI + +
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAA-IAQTGVPVYAWKGETDEEYEWCIEQTI-VFK 122
Query: 563 XEKPLNMILDDXG*LXXT*STLKYPDLLKDVK 658
+PLNMILDD G L KYP L ++
Sbjct: 123 DGQPLNMILDDGGDLTNL-VHAKYPQYLAGIR 153
Score = 93.5 bits (222), Expect = 2e-19
Identities = 58/114 (50%), Positives = 62/114 (54%)
Frame = +1
Query: 487 PIYAFKGETDDEYIWVYXXKXGSXXDXKASQYDLG*XGVTXXNLVHP*VPXXXXXXXXXX 666
P+YA+KGETD+EY W D + L G NLVH P
Sbjct: 99 PVYAWKGETDEEYEWCIEQTI-VFKDGQPLNMILD-DGGDLTNLVHAKYPQYLAGIRGLS 156
Query: 667 XXXXXPGVHNLXXMFRXXLLKVPAINVNDSVTKSKFDNLYGCRESLLDGIKRAT 828
GVHNL M LKVPAINVNDSVTKSKFDNLYG RESL DGIKRAT
Sbjct: 157 EETTT-GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDGIKRAT 209
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 706 MFRXXLLKVPAINVNDSVTKSKFDNLYGCRESL 804
M+ LLK+P+I + SV F+N +G SL
Sbjct: 155 MYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 466 CSCGXVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 308
C CG ++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,229,457
Number of Sequences: 27780
Number of extensions: 288216
Number of successful extensions: 518
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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