Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_J02
(898 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 215 5e-56
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548... 101 6e-22
06_01_0475 + 3375757-3375800,3375898-3376168,3376252-3376440,337... 86 3e-17
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272... 81 2e-15
03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583... 47 2e-05
01_05_0762 + 24990915-24990970,24991076-24991592,24991676-249917... 38 0.011
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 30 2.2
11_06_0027 + 19363678-19363698,19364442-19364484,19366240-193662... 29 3.8
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 6.6
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 215 bits (524), Expect = 5e-56
Identities = 93/184 (50%), Positives = 139/184 (75%)
Frame = +3
Query: 273 GMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLL 452
GMRGL+VFISDIRNC +KE E R++KEL NIR++FK +K L Y+KKKYV K+L+I++L
Sbjct: 5 GMRGLSVFISDIRNCHNKEQERLRVDKELGNIRTRFKNEKGLSPYEKKKYVWKMLYIYML 64
Query: 453 GHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIHV 632
G+D+DFGHME V+L+S+ KY EKQ+GY+ S L+N N+D ++++I +++ND+ RN +
Sbjct: 65 GYDVDFGHMETVSLISAPKYPEKQVGYIVTSCLLNENNDFLRMVINTVRNDIIGRNETYQ 124
Query: 633 NLALQCIANIGSKDMAEAFGTEIPKLLVSGDTMDVVKQSAALCLLRLFRKSPEIIPGGEW 812
LAL + NIG K+ +E+ ++ KLL+S VV++ AALCLLRL+RK+P+++ W
Sbjct: 125 CLALTMVGNIGGKEFSESLAPDVQKLLISSSCRPVVRKKAALCLLRLYRKNPDVVNIDGW 184
Query: 813 TSRI 824
+ R+
Sbjct: 185 SDRM 188
>02_05_1134 -
34352154-34352375,34353683-34353746,34353820-34354859,
34355193-34355261,34355502-34355606,34355992-34356161,
34356244-34356351,34356397-34356525,34356577-34356681,
34357186-34357475,34357575-34357679,34358195-34358289,
34358474-34358569,34358660-34358782,34359120-34359174,
34359254-34359417,34359881-34359971,34360180-34360334,
34360823-34361002,34361314-34361487,34361776-34361917,
34362023-34362325,34362443-34362522
Length = 1354
Score = 101 bits (243), Expect = 6e-22
Identities = 58/166 (34%), Positives = 93/166 (56%)
Frame = +3
Query: 297 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGH 476
I IR CK+ E + +E A IR G+ + + + + KL+FI +LG+ FG
Sbjct: 30 IRAIRACKTAAEERAVVRRECAEIREAI-GENQQE--IRHRNMAKLMFIHMLGYPTHFGQ 86
Query: 477 MEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIHVNLALQCIA 656
ME + L+++ Y EK+IGYL + +L++ +++ L+ S+K DL N V LAL +
Sbjct: 87 MECLKLIAAAGYPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQFIVGLALCALG 146
Query: 657 NIGSKDMAEAFGTEIPKLLVSGDTMDVVKQSAALCLLRLFRKSPEI 794
NI S +MA E+ +L+ S D K+ AALC +R+ RK P++
Sbjct: 147 NICSAEMARDLSPEVERLMRSRDVN--TKKKAALCAIRIVRKVPDL 190
>06_01_0475 +
3375757-3375800,3375898-3376168,3376252-3376440,
3376816-3376989,3378039-3378218,3378565-3378719,
3379509-3379599,3380023-3380186,3380791-3380845,
3380944-3381066,3381160-3381255,3381706-3381833,
3382407-3382466,3382607-3382896,3383127-3383237,
3383318-3383395,3383487-3383659,3384192-3384296,
3385017-3385112
Length = 860
Score = 86.2 bits (204), Expect = 3e-17
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Frame = +3
Query: 297 ISDIRNCKSKEAEIKRINKELANIRSKF-KGDKTLDGYQKKKYVCKLLFIFLLGHDIDFG 473
I IR CK+ E + +E A IR+ +GD+ + + + KL+FI +LG+ FG
Sbjct: 18 IRAIRACKTAAEERAVVRRECAAIRAAISEGDQDY----RHRNMAKLMFIHMLGYPTHFG 73
Query: 474 HMEAVNLLSSNKYSEKQIGYLFISVLVNTNSD-----LIKLIIQSIKNDLQSRNPIHVNL 638
ME + L+++ + EK+IGYL + +L++ + L++ + DL N V L
Sbjct: 74 QMECLKLIAAAGFPEKRIGYLGLMLLLDERQENAMFCFEHLVVLNADRDLNHSNQFIVGL 133
Query: 639 ALQCIANIGSKDMAEAFGTEIPKLLVSGDTMDVVKQSAALCLLRLFRKSPEI 794
AL + NI S +MA E+ +LL S + K+ AALC +R+ RK P++
Sbjct: 134 ALCALGNICSAEMARDLSPEVERLLQSREPN--TKKKAALCSIRIVRKVPDL 183
>01_06_1795 -
39925019-39926029,39926265-39926408,39927200-39927277,
39927722-39927838,39927925-39927981,39928492-39928623,
39928725-39928922,39929364-39929474,39929570-39929785,
39929879-39930064,39930590-39931192
Length = 950
Score = 80.6 bits (190), Expect = 2e-15
Identities = 44/167 (26%), Positives = 89/167 (53%)
Frame = +3
Query: 297 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGH 476
+ I +SK E + I++EL +++ + D + + K+ + +L++ +LGHD FGH
Sbjct: 29 VKSIGEARSKAEEDRIISRELDHLKRRL-ADPDVPRRKMKELLLRLVYAEMLGHDASFGH 87
Query: 477 MEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIHVNLALQCIA 656
+ AV + K+ GYL +S+ ++ DL+ L++ +I+ DL+S N + V AL
Sbjct: 88 IHAVKMTHDESLPLKRTGYLAVSLFLDERHDLVILVVNTIQKDLRSDNYLVVCAALTAAC 147
Query: 657 NIGSKDMAEAFGTEIPKLLVSGDTMDVVKQSAALCLLRLFRKSPEII 797
+ ++ A ++ +LL + V++ A + L R +++SP +
Sbjct: 148 RLIGEEAIPAVLPQVVELL--AHPKEAVRKKAVMALHRFYQRSPSSV 192
>03_02_1035 -
13557425-13557721,13557855-13558058,13558143-13558332,
13558450-13558841,13558931-13559023,13559297-13559500,
13559572-13559635,13559760-13559806,13559825-13559971,
13560243-13560335,13560420-13560599,13560993-13561128,
13561216-13561466,13561556-13561669,13561794-13561991,
13562050-13562110,13562921-13563210
Length = 986
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/130 (22%), Positives = 62/130 (47%)
Frame = +3
Query: 408 QKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLII 587
++K V K++ +G D+ + VN + + K++ YL++ + DL L +
Sbjct: 119 KRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAV 178
Query: 588 QSIKNDLQSRNPIHVNLALQCIANIGSKDMAEAFGTEIPKLLVSGDTMDVVKQSAALCLL 767
+ D Q NP+ LA++ + I + E + + L D V+++AA+C+
Sbjct: 179 NTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDD--PYVRKTAAICVA 236
Query: 768 RLFRKSPEII 797
+L+ + E++
Sbjct: 237 KLYDINAELV 246
>01_05_0762 +
24990915-24990970,24991076-24991592,24991676-24991753,
24993678-24993743,24994819-24994943,24995414-24995612,
24995909-24996137,24996259-24996425,24996526-24996735,
24997245-24997355,24997436-24997612,24997826-24998284,
24998676-24998966
Length = 894
Score = 37.9 bits (84), Expect = 0.011
Identities = 27/122 (22%), Positives = 59/122 (48%)
Frame = +3
Query: 318 KSKEAEIKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 497
KS+ A++K+ ++LA R+ D+ D +++ ++ G D+ E V
Sbjct: 20 KSEVADLKQQLRQLAGSRAPDADDQRRDVFKR------VISCMTAGIDVSAAFGEMVLCS 73
Query: 498 SSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIHVNLALQCIANIGSKDM 677
+++ K++ YL++ V + DL L I ++ D ++P LAL+ + ++ ++
Sbjct: 74 ATSDVVLKKMCYLYVGVHARNHPDLALLTINFLQRDCHDQDPTIRGLALRSLCSLRVPNL 133
Query: 678 AE 683
E
Sbjct: 134 VE 135
>01_07_0353 +
42962769-42962972,42963062-42963138,42963571-42963817,
42963907-42964476,42964998-42965171,42965514-42965640,
42965719-42965828,42966707-42966907,42966999-42967966,
42968110-42968358,42968760-42969105
Length = 1090
Score = 30.3 bits (65), Expect = 2.2
Identities = 28/121 (23%), Positives = 50/121 (41%)
Frame = +3
Query: 429 KLLFIFLLGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDL 608
+LL + G D+ + V ++S K++ YL++ + L I + DL
Sbjct: 51 RLLALIAQGVDVAHFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRQNEALLSINIFQKDL 110
Query: 609 QSRNPIHVNLALQCIANIGSKDMAEAFGTEIPKLLVSGDTMDVVKQSAALCLLRLFRKSP 788
NP+ AL+ +A I +A + K + D V++ AA L +L P
Sbjct: 111 SDINPLVRAWALRTMAGIRLHVVAPLVLVAVKK--CARDPSAYVRKCAAYALCKLHDLLP 168
Query: 789 E 791
+
Sbjct: 169 D 169
>11_06_0027 +
19363678-19363698,19364442-19364484,19366240-19366276,
19366359-19366602,19366749-19366765,19366901-19366986,
19367347-19367378,19367455-19367615,19367722-19367818,
19367894-19368085,19368172-19368233,19368302-19368448,
19368776-19369589
Length = 650
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 477 MEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIHVNL 638
++A +L YS++ I +I + +SD+ + I +++N +SR H NL
Sbjct: 381 IDAARVLEPKSYSDQDILEKYIICMDRDSSDVSERIRNAMRNCNESRQEYHFNL 434
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 375 KFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLLS 500
KF G T +G+Q + +V + ++ HD+ G M LS
Sbjct: 228 KFSGQVTYNGHQMEDFVPQRTAAYISQHDLHIGEMTVRETLS 269
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,945,660
Number of Sequences: 37544
Number of extensions: 395773
Number of successful extensions: 994
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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