Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_J02
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.94 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   1.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   1.2  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   3.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   3.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   5.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.6  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   8.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 280 RIPSPLTAGILPSDLSNTSFKP 215
           +IP  +TAGI P  + N+ ++P
Sbjct: 534 KIPLRMTAGIDPKSIFNSGYRP 555


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 160 QSELQEPGVKFQ 125
           QSELQ PGVKF+
Sbjct: 443 QSELQMPGVKFE 454


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 160 QSELQEPGVKFQ 125
           QSELQ PGVKF+
Sbjct: 443 QSELQMPGVKFE 454


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 162 YKANYKNPV*NFNSYRPSLRFN 97
           YK NY N   N N+Y   L +N
Sbjct: 94  YKYNYNNNNYNNNNYNKKLYYN 115


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 162 YKANYKNPV*NFNSYRPSLRFN 97
           YK NY N   N N+Y   L +N
Sbjct: 94  YKYNYNNNNYNNNNYNKKLYYN 115


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 225 LVFDKSLGNMPAVRGDGMRGL 287
           LV   +  NMPA  G+GM G+
Sbjct: 44  LVGTPAAPNMPAEEGEGMAGV 64


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 252 MPAVRGDGMRGLAVFISDIRNCKSK 326
           MP ++GDG     + I +  NC  +
Sbjct: 201 MPTLKGDGRHMEVIKIKNFDNCDQR 225


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 229 CSISHLAICLPSEEMVCEGSLSL 297
           C+++ L  CL SE   CE ++ +
Sbjct: 166 CALTTLTDCLRSELAQCESNIKV 188


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,384
Number of Sequences: 438
Number of extensions: 4980
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)