Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_J01
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 214 4e-55
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 214 4e-55
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 214 4e-55
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 214 4e-55
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 214 4e-55
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 213 6e-55
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 213 6e-55
BC128389-1|AAI28390.1| 1691|Homo sapiens ADAMTS-like 3 protein. 32 3.3
AB033059-1|BAA86547.1| 1023|Homo sapiens KIAA1233 protein protein. 32 3.3
BC128390-1|AAI28391.1| 1682|Homo sapiens ADAMTSL3 protein protein. 31 4.3
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 214 bits (522), Expect = 4e-55
Identities = 98/126 (77%), Positives = 114/126 (90%)
Frame = +1
Query: 97 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK ILE
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 457 SQSKGQ 474
++K +
Sbjct: 121 RKAKSR 126
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 214 bits (522), Expect = 4e-55
Identities = 98/126 (77%), Positives = 114/126 (90%)
Frame = +1
Query: 97 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK ILE
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 457 SQSKGQ 474
++K +
Sbjct: 121 RKAKSR 126
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 214 bits (522), Expect = 4e-55
Identities = 98/126 (77%), Positives = 114/126 (90%)
Frame = +1
Query: 97 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK ILE
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 457 SQSKGQ 474
++K +
Sbjct: 121 RKAKSR 126
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 214 bits (522), Expect = 4e-55
Identities = 98/126 (77%), Positives = 114/126 (90%)
Frame = +1
Query: 97 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK ILE
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 457 SQSKGQ 474
++K +
Sbjct: 121 RKAKSR 126
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 214 bits (522), Expect = 4e-55
Identities = 98/126 (77%), Positives = 114/126 (90%)
Frame = +1
Query: 97 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK ILE
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 457 SQSKGQ 474
++K +
Sbjct: 121 RKAKSR 126
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 213 bits (521), Expect = 6e-55
Identities = 97/126 (76%), Positives = 114/126 (90%)
Frame = +1
Query: 97 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
MKFN VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK ILE
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 457 SQSKGQ 474
++K +
Sbjct: 121 RKAKSR 126
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 213 bits (521), Expect = 6e-55
Identities = 97/126 (76%), Positives = 114/126 (90%)
Frame = +1
Query: 97 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
MKFN VTS R KNRKRHF+APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK ILE
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 457 SQSKGQ 474
++K +
Sbjct: 121 RKAKSR 126
>BC128389-1|AAI28390.1| 1691|Homo sapiens ADAMTS-like 3 protein.
Length = 1691
Score = 31.9 bits (69), Expect = 3.3
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 127 RRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKV 306
RRK + +A RR+ +S + ++L V+S + + +++ G+Q ++
Sbjct: 841 RRKQVCQRLAAKG--RRIPLSEMMCRDLPGLPLVRSCQMPECSKIKSEMKTKLGEQGPQI 898
Query: 307 MQVYRKKFVVYIERIQREKAN---GATAYVGIHPSKCVIVKLKMNKDRKAILESQSKGQT 477
+ V R VYI+ + ++ N G+ AY + P+ VI+K + + +K++++ + G+
Sbjct: 899 LSVQR----VYIQTREEKRINLTIGSRAY--LLPNTSVIIKCPVRRFQKSLIQWEKDGRC 952
Query: 478 GCAWQRQG*IHRGNCHSHG 534
+R G G+ HG
Sbjct: 953 LQNSKRLGITKSGSLKIHG 971
>AB033059-1|BAA86547.1| 1023|Homo sapiens KIAA1233 protein protein.
Length = 1023
Score = 31.9 bits (69), Expect = 3.3
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 127 RRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKV 306
RRK + +A RR+ +S + ++L V+S + + +++ G+Q ++
Sbjct: 173 RRKQVCQRLAAKG--RRIPLSEMMCRDLPGLPLVRSCQMPECSKIKSEMKTKLGEQGPQI 230
Query: 307 MQVYRKKFVVYIERIQREKAN---GATAYVGIHPSKCVIVKLKMNKDRKAILESQSKGQT 477
+ V R VYI+ + ++ N G+ AY + P+ VI+K + + +K++++ + G+
Sbjct: 231 LSVQR----VYIQTREEKRINLTIGSRAY--LLPNTSVIIKCPVRRFQKSLIQWEKDGRC 284
Query: 478 GCAWQRQG*IHRGNCHSHG 534
+R G G+ HG
Sbjct: 285 LQNSKRLGITKSGSLKIHG 303
>BC128390-1|AAI28391.1| 1682|Homo sapiens ADAMTSL3 protein protein.
Length = 1682
Score = 31.5 bits (68), Expect = 4.3
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 127 RRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKV 306
RRK + +A RR+ +S + ++L V+S + + +++ G+Q ++
Sbjct: 841 RRKQVCQRLAAKG--RRIPLSEMMCRDLPGFPLVRSCQMPECSKIKSEMKTKLGEQGPQI 898
Query: 307 MQVYRKKFVVYIERIQREKAN---GATAYVGIHPSKCVIVKLKMNKDRKAILESQSKGQT 477
+ V R VYI+ + ++ N G+ AY + P+ VI+K + + +K++++ + G+
Sbjct: 899 LSVQR----VYIQTREEKRINLTIGSRAY--LLPNTSVIIKCPVRRFQKSLIQWEKDGRC 952
Query: 478 GCAWQRQG*IHRGNCHSHG 534
+R G G+ HG
Sbjct: 953 LQNSKRLGITKSGSLKIHG 971
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,639,850
Number of Sequences: 237096
Number of extensions: 1656922
Number of successful extensions: 4101
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4101
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -