Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_J01
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   210   3e-54
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   210   3e-54
BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p pro...    31   1.6  
BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    30   5.0  
AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA ...    30   5.0  
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    30   5.0  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  210 bits (512), Expect = 3e-54
 Identities = 98/135 (72%), Positives = 115/135 (85%)
 Frame = +1

Query: 97  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAILE
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120

Query: 457 SQSKGQTGCAWQRQG 501
            + KG+     + +G
Sbjct: 121 RRGKGRLAALGKDKG 135



 Score = 38.3 bits (85), Expect = 0.014
 Identities = 18/25 (72%), Positives = 18/25 (72%)
 Frame = +2

Query: 434 KTAKQSSNRRAKGRLAALGKDKGKY 508
           K  K    RR KGRLAALGKDKGKY
Sbjct: 113 KDRKAILERRGKGRLAALGKDKGKY 137


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  210 bits (512), Expect = 3e-54
 Identities = 98/135 (72%), Positives = 115/135 (85%)
 Frame = +1

Query: 97  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 276
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PLSKELRQK+NV+SMPIR+DDEVQV+RG
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPLSKELRQKYNVRSMPIRRDDEVQVIRG 60

Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILE 456
           H+KG QVGKV+Q YRKKFVVY+E+IQRE ANG   YVGIHPSK +IVKLK++KDRKAILE
Sbjct: 61  HFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILE 120

Query: 457 SQSKGQTGCAWQRQG 501
            + KG+     + +G
Sbjct: 121 RRGKGRLAALGKDKG 135



 Score = 38.3 bits (85), Expect = 0.014
 Identities = 18/25 (72%), Positives = 18/25 (72%)
 Frame = +2

Query: 434 KTAKQSSNRRAKGRLAALGKDKGKY 508
           K  K    RR KGRLAALGKDKGKY
Sbjct: 113 KDRKAILERRGKGRLAALGKDKGKY 137


>BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p protein.
          Length = 1316

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 466  CSAIRGLLCGLYSSSA*Q*HTLKGECRHMLLHHWPFLFESSQCIQQTFYDTPASLCQPVD 287
            CSAI+ +  G+Y          +    H+L + WP +FE+S  + Q F D+   L  P D
Sbjct: 1245 CSAIKHMSLGVYGFGC------EDALTHLLNYVWPNIFETSPHLVQAFMDSVDGLGCPWD 1298


>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 250 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 339
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AE014134-129|AAF51478.2| 1340|Drosophila melanogaster CG2807-PA
            protein.
          Length = 1340

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -3

Query: 466  CSAIRGLLCGLYSSSA*Q*HTLKGECRHMLLHHWPFLFESSQCIQQTFYDT 314
            CSAI+ +  G+Y          +    H+L + WP +FE+S  + Q F D+
Sbjct: 1225 CSAIKHMSLGVYGFGC------EDALTHLLNYVWPNIFETSPHLVQAFMDS 1269


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 250 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 339
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,284,480
Number of Sequences: 53049
Number of extensions: 550952
Number of successful extensions: 1461
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)