Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_J01
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.6  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   5.0  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.6  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   8.8  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   8.8  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   8.8  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   8.8  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   8.8  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   8.8  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   8.8  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 409 HTLKGECRHMLLHHWPFLFESS 344
           HT + +C H LL H P L + S
Sbjct: 330 HTPEPDCIHELLGHMPLLADPS 351


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 46  CFSISVLSRVVLAKSDRMKFNKQVTSSRRKN 138
           CF    L +  + ++D ++ +K V  + RKN
Sbjct: 77  CFITCALEKSHIIQNDEIQLDKLVEMANRKN 107


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 357 SLNPLNVYNKLF 322
           S+NP+NVY K +
Sbjct: 35  SINPINVYTKAY 46


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 391 IHPSKCVIVKLKMNKDRKAILES 459
           +HPS+C   K+   +  K +L++
Sbjct: 16  LHPSRCTQGKVNYREKEKEVLDN 38


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 391 IHPSKCVIVKLKMNKDRKAILES 459
           +HPS+C   K+   +  K +L++
Sbjct: 16  LHPSRCTQGKVNYREKEKEVLDN 38


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 270 YNLNFIVFANRHGFYI 223
           YN +FI++++   FYI
Sbjct: 339 YNTDFIIYSSLSSFYI 354


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 370 HWPFLFESSQCIQQTF 323
           H+P++F  + CI Q+F
Sbjct: 117 HFPYVFGEAFCIIQSF 132


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 21  TIGNSLRFLLFYFGS*PCRFGEERQNEVQQAGDFLKKEKQEE 146
           T  NSLR     F     R+  ER+    +  ++ KK++Q E
Sbjct: 212 TSSNSLRNRTHDFQHTSSRYSRERRCSRDRNREYRKKDRQYE 253


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 21  TIGNSLRFLLFYFGS*PCRFGEERQNEVQQAGDFLKKEKQEE 146
           T  NSLR     F     R+  ER     +  ++ KK++Q E
Sbjct: 201 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYE 242


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 21  TIGNSLRFLLFYFGS*PCRFGEERQNEVQQAGDFLKKEKQEE 146
           T  NSLR     F     R+  ER     +  ++ KK++Q E
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYE 253


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 21  TIGNSLRFLLFYFGS*PCRFGEERQNEVQQAGDFLKKEKQEE 146
           T  NSLR     F     R+  ER     +  ++ KK++Q E
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYE 253


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 21  TIGNSLRFLLFYFGS*PCRFGEERQNEVQQAGDFLKKEKQEE 146
           T  NSLR     F     R+  ER     +  ++ KK++Q E
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYE 253


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 21  TIGNSLRFLLFYFGS*PCRFGEERQNEVQQAGDFLKKEKQEE 146
           T  NSLR     F     R+  ER     +  ++ KK++Q E
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYE 253


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,006
Number of Sequences: 438
Number of extensions: 3150
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)