Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I24
(878 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 29 0.87
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 28 2.0
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 2.7
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 27 4.7
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 27 4.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 4.7
SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 8.1
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 8.1
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 26 8.1
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 26 8.1
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 8.1
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 662 DSTFNDTLQDNEEPLGSSTASKETLEANKSNE 757
+ TF + + NE GS+ A ETLE SNE
Sbjct: 15 EPTFENVSEHNEHDSGSAEAQVETLEVPLSNE 46
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 367 NGDEKLIHNNPILSAVIKNHLQSYD 441
N +K IH NP+LS V + +S+D
Sbjct: 808 NNSQKDIHRNPLLSHVFDTNTKSFD 832
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 638 KNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNEN 760
K++C L++ + LQ+ ST + +T +A+ +NEN
Sbjct: 421 KSICGDILENRWKSLLQEISSQKQLSTDASQTQDASIANEN 461
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 626 LISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSN 754
L PK+ N +ST D L +EEP +++KE+ + SN
Sbjct: 93 LEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSNKESTNLDNSN 135
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 425 IYNHMIPES----PTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCE 592
IYNH+ P + PT D + I ++I + LR+IS S T P+ + + S +
Sbjct: 499 IYNHLDPVAMRLNPTVDLSFSKGIHPTRILFTRKSSSILRMISHSNTDPVELRSYNQSLQ 558
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 4.7
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +2
Query: 482 IISSKINDLTNDTENLRLISDSCTSPITS--KDKDNSCETYMEAKEFSPDLISPKNLCNG 655
+ S++N+L + + S+ +S +++ +K+ + T E E L + LCN
Sbjct: 529 VYESQLNELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNELSESKNSL---QTLCNA 585
Query: 656 FLDSTFNDTLQ--DNEEPLGS-STASKETLEANKSNEN 760
F + +Q +NE+ S T+ K+ E+++ EN
Sbjct: 586 FQEKLAKSVMQLKENEQNFSSLDTSFKKLNESHQELEN 623
>SPAC14C4.07 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 572 DKDNSCETYMEAKEFSPDLISPKNLCNGF 658
+ DN C + SP LI P N N F
Sbjct: 112 NNDNCCREIARRRSLSPLLILPLNFINAF 140
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 25.8 bits (54), Expect = 8.1
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Frame = +2
Query: 452 PTQDFERTPIIIS--SKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPD 625
PT D TP S + +L ENL ++ + ++S DNS ++ ++
Sbjct: 439 PTNDHSSTPAQSERDSDVEELREQLENLTALTKKLSERLSSSTFDNS--KFIRTEDKDTV 496
Query: 626 LISPKNLCN---GFLDSTFNDTLQD 691
+ +C F D T + TL+D
Sbjct: 497 RSAKLEICEKFFSFADVTDDPTLKD 521
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 518 TENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDLISPKNL 646
T L +S + + I+ +D DNS + E+ SP + PK L
Sbjct: 634 TRRLSDLSVNSSGQISKQDFDNSNSIFSESSLSSPIIEEPKTL 676
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 431 CKWFFITADRMGLLCINFSSPFVDSNVFLRSIFFVML 321
CK +F+ DR+ +L + FS ++ ++F+V+L
Sbjct: 717 CKHYFL--DRLAILFLTFSPTMCMLSISFEALFYVVL 751
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 180 KMGSNSSKPTDTSLVLKTELEL 245
K SN S+PT TS LKT+ L
Sbjct: 532 KATSNKSRPTTTSTELKTDARL 553
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,177,334
Number of Sequences: 5004
Number of extensions: 65530
Number of successful extensions: 230
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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