Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I24
         (878 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P...    29   8.5  
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P...    29   8.5  

>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
           isoform A protein.
          Length = 1420

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
 Frame = +2

Query: 392 ITPFYLLL*KTIYNHMIPESPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSK 571
           I PF  L  K   + M+ +SP    ++    I +++     D E+    ++        +
Sbjct: 576 IKPFDELESKNAKDEMVEQSPMSK-QKAENKILARLESFEEDVEDHG--NEEENEEEHEE 632

Query: 572 DKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTLQDNEEPL-GSSTASKETLEANK 748
           DK  S    +EA++   D +S  ++     DS+    +++NE P+ G S  SK+T E+  
Sbjct: 633 DKSISEFVDLEAEDAGKDYMSGDSM-----DSSLRREMEENEIPIDGESVGSKDTEESTP 687

Query: 749 SNENXXPS 772
              +   S
Sbjct: 688 EESDGDDS 695


>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
           isoform B protein.
          Length = 1430

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
 Frame = +2

Query: 392 ITPFYLLL*KTIYNHMIPESPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSK 571
           I PF  L  K   + M+ +SP    ++    I +++     D E+    ++        +
Sbjct: 586 IKPFDELESKNAKDEMVEQSPMSK-QKAENKILARLESFEEDVEDHG--NEEENEEEHEE 642

Query: 572 DKDNSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTLQDNEEPL-GSSTASKETLEANK 748
           DK  S    +EA++   D +S  ++     DS+    +++NE P+ G S  SK+T E+  
Sbjct: 643 DKSISEFVDLEAEDAGKDYMSGDSM-----DSSLRREMEENEIPIDGESVGSKDTEESTP 697

Query: 749 SNENXXPS 772
              +   S
Sbjct: 698 EESDGDDS 705


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,709,818
Number of Sequences: 53049
Number of extensions: 618277
Number of successful extensions: 1485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)