Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I23
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.18
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 0.96
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.2
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 29 3.9
01_03_0005 + 11568545-11569119,11569179-11569191 29 3.9
07_01_0080 + 587674-588510 26 4.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.1
12_01_0373 + 2897874-2898911 25 6.1
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 24 6.3
04_04_0009 + 22134160-22134696 29 6.7
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 7.1
02_03_0381 - 18339290-18339994,18340083-18340103,18341925-183419... 28 8.9
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGG--GGXXXXPXXGGXXXXPXXGGTP 629
PPPP G PP P P P GG GG P GG P G P
Sbjct: 345 PPPPPAKGPP-PPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVP 396
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGGTP 629
PPPP PP PP P P G P G P G +P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 622 PPXXGXXXXPPXXGXKXXPPPPXXG 548
PP G PP G PPPP G
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPPPGG 372
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 31.5 bits (68), Expect = 0.96
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = -1
Query: 627 GSPPFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKKXXPXPXGGGXFXXXXKTPP 448
G PP + PP GG P PPP G P+ P P GG P
Sbjct: 290 GMPP---RIPPPPVGGTQPPPPPPPLANG--------PPRSIPPPPMTGGAMANFTPGAP 338
Query: 447 PPP 439
P P
Sbjct: 339 PRP 341
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -1
Query: 594 PPXGGXXPXPPPXXXGXGXFXGXXXXXPKKXXPXPXGGGXFXXXXKTPPPP 442
PP G P PPP G P P P G G PPPP
Sbjct: 278 PPAGPPPPAPPPLPPSHHHHHG---HHPPPPHPLPPGAGAGAGTGAPPPPP 325
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGG 623
PPPP G PP PP P G P GG GG
Sbjct: 1184 PPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGG 1232
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 562 PPXXGXGXFXGGXGGXXQKXXPXXXGGGG 476
PP G G GG GG +K GGGG
Sbjct: 203 PPGNGNGGGGGGGGGGKKKGKKGGGGGGG 231
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 439 GGGGGGFXXXXKXPPP---XGXGXXFFGXXXXXPPKXXXXXXXGGG 567
GGGGGG PPP G G G PP GGG
Sbjct: 81 GGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGG 126
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 568 PPPPXXGXGXFXGGXGGXXQKXXPXXXGGGG 476
PPPP G G GG P GGGG
Sbjct: 93 PPPPYSGGGGGSSTGGGGIYYPPPTGGGGGG 123
>07_01_0080 + 587674-588510
Length = 278
Score = 26.2 bits (55), Expect(2) = 4.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 497 PXPXGGGXFXXXKKPPPPPP 438
P G G F PPPPPP
Sbjct: 80 PRLGGDGMFRRPPPPPPPPP 99
Score = 21.4 bits (43), Expect(2) = 4.8
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 455 PPPPPPXXXKK 423
PPPPPP ++
Sbjct: 116 PPPPPPLFTRR 126
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = -1
Query: 621 PPFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPK----KXXPXPXGGGXFXXXXKT 454
PPF PP G P P G G P + P P G
Sbjct: 49 PPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPP 108
Query: 453 PPPPP 439
PPPPP
Sbjct: 109 PPPPP 113
>12_01_0373 + 2897874-2898911
Length = 345
Score = 24.6 bits (51), Expect(2) = 6.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 455 PPPPPPXXXKKKK 417
PPPPPP +K+K
Sbjct: 159 PPPPPPAEEEKEK 171
Score = 22.6 bits (46), Expect(2) = 6.1
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -2
Query: 461 KKPPPPPP 438
++PPPPPP
Sbjct: 153 RRPPPPPP 160
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 24.2 bits (50), Expect(2) = 6.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 455 PPPPPPXXXKKKK 417
PPPPPP K K+
Sbjct: 82 PPPPPPKQEKAKR 94
Score = 23.0 bits (47), Expect(2) = 6.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 458 KPPPPPP 438
KPPPPPP
Sbjct: 37 KPPPPPP 43
>04_04_0009 + 22134160-22134696
Length = 178
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 583 GXKXXPPPPXXGXGXFXGGXGGXXQKXXPXXXGGGG 476
G PPPP GG GG + GGGG
Sbjct: 59 GGSTAPPPPPPSSSGKSGGGGGSNIREAAASGGGGG 94
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = -2
Query: 623 PPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPPPP 444
PP P PPPP P P P PPPP
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
Query: 443 PP 438
PP
Sbjct: 609 PP 610
Score = 25.0 bits (52), Expect(2) = 7.1
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Frame = -2
Query: 584 GGXXXPPPPXXXXXXFXG-GXXXXXPKXXXPXPXGGGXFXXXKKPPPPPP 438
G PPPP G G P P P PP PPP
Sbjct: 688 GPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPP 737
Score = 21.8 bits (44), Expect(2) = 7.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 455 PPPPPPXXXK 426
PPPPPP K
Sbjct: 764 PPPPPPQAPK 773
>02_03_0381 -
18339290-18339994,18340083-18340103,18341925-18341982,
18342084-18342220,18342480-18342650
Length = 363
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 628 GVPPXXGXXXXPPXXGXKXXPPPPXXGXGXFXGGXGGXXQKXXP 497
GVPP PP G P PP G + G GG P
Sbjct: 207 GVPPPWNPHSAPPSQGL--YPHPPSYGPRNYNPGQGGGRMNYGP 248
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,680,687
Number of Sequences: 37544
Number of extensions: 431107
Number of successful extensions: 4381
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3712
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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