Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP21_F_I23
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.006
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.006
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.006
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.092
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.092
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.092
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 33 0.21
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 0.65
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.65
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.6
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.6
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 2.6
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 2.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 6.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 6.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 8.0
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 8.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPK----XXXPXPXGGGXFXXX 462
GGPP P G PPPP GG P P P G F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 461 KKPPPPP 441
PPPPP
Sbjct: 784 PPPPPPP 790
Score = 35.5 bits (78), Expect = 0.053
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
GGPP P G PPPP GG P P P GG PP
Sbjct: 711 GGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGP-----PPP 761
Query: 449 PPPP 438
PPPP
Sbjct: 762 PPPP 765
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXP 611
PPPP PP PP P GG P GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPK----XXXPXPXGGGXFXXX 462
GGPP P G PPPP GG P P P G F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 461 KKPPPPP 441
PPPPP
Sbjct: 784 PPPPPPP 790
Score = 35.5 bits (78), Expect = 0.053
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
GGPP P G PPPP GG P P P GG PP
Sbjct: 711 GGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGP-----PPP 761
Query: 449 PPPP 438
PPPP
Sbjct: 762 PPPP 765
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXP 611
PPPP PP PP P GG P GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPK----XXXPXPXGGGXFXXX 462
GGPP P G PPPP GG P P P G F
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 461 KKPPPPP 441
PPPPP
Sbjct: 367 PPPPPPP 373
Score = 35.5 bits (78), Expect = 0.053
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
GGPP P G PPPP GG P P P GG PP
Sbjct: 294 GGPPPPPGL---PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGP-----PPP 344
Query: 449 PPPP 438
PPPP
Sbjct: 345 PPPP 348
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXP 611
PPPP PP PP P GG P GG P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.092
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -1
Query: 615 FXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKK-XXPXPXGGGXFXXXXKTPPPPP 439
F GK PP G P PPP G P P P G +PPPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -1
Query: 627 GSPPFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPK-KXXPXPXGGGXFXXXXKTP 451
GSPP G PP PPP G P P P GG +P
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRT-------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 450 PPPP 439
PPPP
Sbjct: 298 PPPP 301
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXG--GXXXXXPKXXXPXPXGGGXFXXXKK 456
G PP P G PPPP G P P P GG +
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 455 PPPPPP 438
PPPP
Sbjct: 295 GSPPPP 300
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 22/70 (31%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
G PP + P G PPPP P P P GG
Sbjct: 270 GSPPPPPTGSPPPPPAGGS-PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS 328
Query: 449 PPPPXXXKKK 420
PPPP K++
Sbjct: 329 PPPPPRQKRQ 338
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
G PP + P PPP G P P P G PP
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG-----SPPP 299
Query: 449 PPPP 438
PPPP
Sbjct: 300 PPPP 303
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 477 PPPPXXXGXX---FWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGGTP 629
PPPP G PP PP P P GG P G P G+P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS-PPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.092
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -1
Query: 615 FXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKK-XXPXPXGGGXFXXXXKTPPPPP 439
F GK PP G P PPP G P P P G +PPPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -1
Query: 627 GSPPFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPK-KXXPXPXGGGXFXXXXKTP 451
GSPP G PP PPP G P P P GG +P
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRT-------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 450 PPPP 439
PPPP
Sbjct: 319 PPPP 322
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXG--GXXXXXPKXXXPXPXGGGXFXXXKK 456
G PP P G PPPP G P P P GG +
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 455 PPPPPP 438
PPPP
Sbjct: 316 GSPPPP 321
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 22/70 (31%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
G PP + P G PPPP P P P GG
Sbjct: 291 GSPPPPPTGSPPPPPAGGS-PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS 349
Query: 449 PPPPXXXKKK 420
PPPP K++
Sbjct: 350 PPPPPRQKRQ 359
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
G PP + P PPP G P P P G PP
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG-----SPPP 320
Query: 449 PPPP 438
PPPP
Sbjct: 321 PPPP 324
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 477 PPPPXXXGXX---FWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGGTP 629
PPPP G PP PP P P GG P G P G+P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS-PPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.092
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = -1
Query: 615 FXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKK-XXPXPXGGGXFXXXXKTPPPPP 439
F GK PP G P PPP G P P P G +PPPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -1
Query: 627 GSPPFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPK-KXXPXPXGGGXFXXXXKTP 451
GSPP G PP PPP G P P P GG +P
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRT-------GSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 450 PPPP 439
PPPP
Sbjct: 304 PPPP 307
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXG--GXXXXXPKXXXPXPXGGGXFXXXKK 456
G PP P G PPPP G P P P GG +
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 455 PPPPPP 438
PPPP
Sbjct: 301 GSPPPP 306
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 22/70 (31%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
G PP + P G PPPP P P P GG
Sbjct: 276 GSPPPPPTGSPPPPPAGGS-PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS 334
Query: 449 PPPPXXXKKK 420
PPPP K++
Sbjct: 335 PPPPPRQKRQ 344
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = -2
Query: 629 GGPPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPP 450
G PP + P PPP G P P P G PP
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG-----SPPP 305
Query: 449 PPPP 438
PPPP
Sbjct: 306 PPPP 309
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 477 PPPPXXXGXX---FWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGGTP 629
PPPP G PP PP P P GG P G P G+P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS-PPPPRAGSPPPPPPPRGSP 313
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +2
Query: 425 FXXXXGGGGGVFXXXKKXPPPXGXGXXFLGXXXXXPXKXP---XPXXWGGGXGFXPPXGG 595
F GGGGG PPP G G L + P P GGG G P GG
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 628 GVPPXXGXXXXPPXXGXKXXPPPPXXGXGXFXGGXGG 518
G PP G PP G PPP G G GG GG
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGG-PGGPGG 216
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -3
Query: 628 GVPPXXGXXXXPPXXGXKXXPPPPXXGXGXFXGGXGGXXQKXXPXXXGG 482
G PP G PP G + PP G G G GG P GG
Sbjct: 172 GGPPGHGGMGGPPGHGGQGG-PPGHGGMGGPPPGQGGPGGPGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 628 GVPPXXGXXXXPPXXGXKXXPPPPXXGXGXFXGGXGG 518
G PP G PP G PPP G G GG GG
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGG-PGGPGG 496
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -3
Query: 628 GVPPXXGXXXXPPXXGXKXXPPPPXXGXGXFXGGXGGXXQKXXPXXXGG 482
G PP G PP G + PP G G G GG P GG
Sbjct: 452 GGPPGHGGMGGPPGHGGQGG-PPGHGGMGGPPPGQGGPGGPGGPGGPGG 499
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 622 PPXXGXXXXPPXXGXKXXPPPPXXGXGXFXGGXGGXXQKXXPXXXGGGG 476
PP PP G PPP GG GG P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = -1
Query: 624 SPPFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKKXXPXPXGGGXFXXXXKTPPP 445
+P + PP G P PPP G G P P G PPP
Sbjct: 280 TPGMTPRPPPPPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 444 PP 439
PP
Sbjct: 338 PP 339
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Frame = -2
Query: 626 GPPXXXXXTXXPXXG---GXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKK 456
GPP P G PPPP G P P P G
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI---- 381
Query: 455 PPPPPP 438
PPPPPP
Sbjct: 382 PPPPPP 387
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGG 566
PPPP PP PP + P P G G
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 477 PPPPXXXGXXFWXX-PPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGGTP 629
PPPP G W PP PP + P P G P P GG P
Sbjct: 287 PPPPPSSG--MWPPPPPPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMP 334
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -2
Query: 623 PPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPPPP 444
PP P G PPPP GG P P G PPPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM---------PPPPPPGMRYPGGMPPPP 351
Query: 443 PP 438
PP
Sbjct: 352 PP 353
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 427 FXXXGGGGGGFXXXXKXPPPXGXGXXFFGXXXXXPPKXXXXXXXGGGGXXXPP 585
F GGGGG PPP G G GGGG PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 421 FFFXXXGGGGGGFXXXXKXPPPXGXGXXFFGXXXXXPPKXXXXXXXGGGGXXXPP 585
F GGGG G P P G G G P GGGG PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGG-GGLALPQLPPLSLPSLGGGGGCCPPP 70
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = -1
Query: 624 SPPFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKKXXPXPXGGGXFXXXXKTPPP 445
+P + PP G P PPP G G P P G PPP
Sbjct: 290 TPGMTPRPPPPPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 444 PP 439
PP
Sbjct: 348 PP 349
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Frame = -2
Query: 626 GPPXXXXXTXXPXXG---GXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKK 456
GPP P G PPPP G P P P G
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI---- 391
Query: 455 PPPPPP 438
PPPPPP
Sbjct: 392 PPPPPP 397
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGG 566
PPPP PP PP + P P G G
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +3
Query: 477 PPPPXXXGXXFWXX-PPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGGTP 629
PPPP G W PP PP + P P G P P GG P
Sbjct: 297 PPPPPSSG--MWPPPPPPPPGRTPGPP--GMPGMPPPPPPSRFGPPGMGGMP 344
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -2
Query: 623 PPXXXXXTXXPXXGGXXXPPPPXXXXXXFXGGXXXXXPKXXXPXPXGGGXFXXXKKPPPP 444
PP P G PPPP GG P P G PPPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM---------PPPPPPGMRYPGGMPPPP 361
Query: 443 PP 438
PP
Sbjct: 362 PP 363
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 622 PPXXGXXXXPPXXGXKXXPPPPXXGXGXFXGGXGGXXQKXXPXXXGGGG 476
PP PP G PPP GG GG P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +2
Query: 446 GGGVFXXXKKXPPPXGXGXXFLGXXXXXPXKXPXPXXWGGGXGFXPPXGG 595
GGG G G + P P P GGG G+ P GG
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +2
Query: 446 GGGVFXXXKKXPPPXGXGXXFLGXXXXXPXKXPXPXXWGGGXGFXPPXGG 595
GGG G G + P P P GGG G+ P GG
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = -1
Query: 618 PFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKKXXPXPXGGGXFXXXXKTPPPPP 439
P G P P PPP G P P P G PPPPP
Sbjct: 596 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = -1
Query: 618 PFXGKXXXPPXGGXXPXPPPXXXGXGXFXGXXXXXPKKXXPXPXGGGXFXXXXKTPPPPP 439
P G P P PPP G P P P G PPPPP
Sbjct: 422 PNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 583 GXKXXPPPPXXGXGXFXGGXGGXXQKXXPXXXGGGG 476
G PPPP G GG GG GGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 519 PPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGG 623
PP PP P P GGG GG GG
Sbjct: 306 PPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 519 PPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGG 623
PP PP P P GGG GG GG
Sbjct: 306 PPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 753 GGGXPPRGXXXXXGSPXXKPPAAP 824
GGG PPRG G PPA P
Sbjct: 623 GGGGPPRGPGGGGGGGPTGPPAPP 646
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 753 GGGXPPRGXXXXXGSPXXKPPAAP 824
GGG PPRG G PPA P
Sbjct: 623 GGGGPPRGPGGGGGGGPTGPPAPP 646
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 595 PPXXGXKXXPPPPXXGXGXFXGGXGGXXQKXXPXXXGGG 479
PP G PPPP G GG GG GGG
Sbjct: 773 PPRGGMHHMPPPPSFRGG--RGGHGGPPPPHFDRRGGGG 809
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 477 PPPPXXXGXXFWXXPPXPPXKXPXPXXGGGGXXXXPXXGGXXXXPXXGGTPXKKFF 644
PPPP PP PP P P GG P GG KK +
Sbjct: 562 PPPPPPLPQNLSGAPPPPP---PPPPMLGGPPPPPPPPGGLMGPASNDAKTIKKIY 614
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 628 GVPPXXGXXXXPPXXGXKXXPPPP 557
G PP G PP G PPPP
Sbjct: 142 GPPPCFGPACPPPCFGPACAPPPP 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,205,777
Number of Sequences: 27780
Number of extensions: 233386
Number of successful extensions: 2168
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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