Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I22
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490...    31   1.6  
12_02_0715 - 22453747-22453935,22454347-22454457,22454514-224545...    29   4.8  
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120...    29   6.4  
05_04_0325 + 20289666-20289675,20290137-20290382,20291241-202914...    28   8.5  

>01_05_0104 +
           18148396-18148642,18148797-18148886,18148972-18149072,
           18149174-18149287,18149381-18149462,18149592-18149659,
           18149747-18149806,18149885-18150009,18150663-18150861,
           18150942-18151073,18151152-18151244,18151360-18152244,
           18152339-18152664,18153003-18153341,18153911-18153996,
           18154054-18154139
          Length = 1010

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/84 (23%), Positives = 43/84 (51%)
 Frame = +2

Query: 554 TDEDILCIRNLGNGVDISEKDYIIQIIYIHNRENVLSR*DLPVLSTEVSIXRLILMELVX 733
           +D D+  I + GNG D+ E     +I  +H ++N +++ +  + + + SI RL++     
Sbjct: 538 SDRDVDMITDEGNGSDLKE-----EISRLHMQDNDIAKLEAKLENVQRSIDRLVMSLPNV 592

Query: 734 GAACXLFDWRSSRETRXXQIIXTL 805
           G  C     +S+R  +  +++  L
Sbjct: 593 GTQCNETTPKSNRAKKKKRMLLPL 616


>12_02_0715 -
           22453747-22453935,22454347-22454457,22454514-22454572,
           22454893-22455067,22455255-22455307,22455670-22455739,
           22457044-22457218,22457639-22457703,22458196-22460826
          Length = 1175

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 427 RPSPCTRQTDL-EQVDSLRVRTGYD 498
           R   CTR+ DL EQ+ SL V+TG++
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFE 377


>04_04_1571 +
           34504087-34504421,34505002-34505731,34506091-34512077,
           34512493-34513964,34514114-34514377,34514761-34514978,
           34515759-34516030,34516190-34516559,34516578-34516797,
           34516819-34518931,34518941-34519193,34519269-34519401,
           34520597-34521114,34521207-34522115,34522195-34522368,
           34522833-34522882,34523963-34524035,34524413-34524477,
           34524736-34525522,34525622-34525878,34525989-34526109,
           34526315-34526956
          Length = 5320

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = -2

Query: 739 GSXHEFHQN*SXNAHFSRQYREVSSR*DIFSI---MYIDNLYNIIFLTNIYTV 590
           G+   F    +  A  SR  R+V +  DI S+   +Y + +YN++FL N+ ++
Sbjct: 186 GTLFRFPLRTAEQASLSRLSRQVYTEDDILSLFAQLYEEAVYNLLFLKNVLSL 238


>05_04_0325 +
           20289666-20289675,20290137-20290382,20291241-20291436,
           20291517-20291776,20291934-20292061,20292447-20292650,
           20292780-20292830,20292961-20293227
          Length = 453

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 647 YYVYR*SV*YNLSH*YLHRFQGYEYRVYPRRSVERAL 537
           YY++   V   L+  YLH F    Y   PRR  ERAL
Sbjct: 296 YYIFAGFVFIPLTQPYLHEFGEDWYNNSPRRLCERAL 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,812,588
Number of Sequences: 37544
Number of extensions: 259383
Number of successful extensions: 603
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)