Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP21_F_I19
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0100 + 13389899-13390219,13390723-13390841,13391220-133913...    35   0.073
10_08_0080 - 14707309-14707420,14707799-14707846,14708418-147085...    29   6.3  
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511...    28   8.3  
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747           28   8.3  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           28   8.3  

>07_03_0100 +
           13389899-13390219,13390723-13390841,13391220-13391315,
           13391481-13391553,13392055-13392123
          Length = 225

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = -3

Query: 509 PSKTQGRVQRVQPPLHN*GCAC*VSRGKGAPALAHMGTHRLPGPYSXTNPRAVGAVNDRV 330
           P ++     RV    H   C C   R  G+P+L    +   PGP+S T       +N RV
Sbjct: 45  PPQSLHASSRVPAARHRIVCPC--RRRGGSPSLTRRSSPEKPGPFSQTRSPETEKMNKRV 102

Query: 329 VKKTRSHM 306
            ++ R +M
Sbjct: 103 ERRKRKYM 110


>10_08_0080 -
           14707309-14707420,14707799-14707846,14708418-14708543,
           14708586-14708743
          Length = 147

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 437 SRGKGAPALAHMGTHRLPGPYSXTNPRAVGAVNDRVVKK 321
           SR  G+P+L    +   PGP+S T       +N RV ++
Sbjct: 53  SRRGGSPSLTRRSSPEKPGPFSQTRSPETEKMNKRVERR 91


>09_06_0374 +
           22649455-22650024,22650085-22650637,22650812-22651147,
           22651171-22652605,22652939-22653062
          Length = 1005

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -1

Query: 844 RKPXGLXXGR-PXGRGAXPXXXGXXGQXXGRRPPSP 740
           R+P GL   R P GR   P      G+  GRRPP P
Sbjct: 422 RRPPGLARPRKPLGR--RPPGPARPGKPLGRRPPGP 455


>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
          Length = 368

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -2

Query: 846 PASPXGXGXXGPGAGXXGPXXQGXXAXXGAGG 751
           P +P G G  G G G  G   +G     G GG
Sbjct: 200 PVAPPGNGNGGGGGGGGGGKKKGKKGGGGGGG 231


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +2

Query: 752 PPAPXLAXXPXXXGPXXPAPGPXXP*PXGLAG 847
           PP P     P    P  P PGP  P P G AG
Sbjct: 349 PPPPPPPAAPA--APRPPGPGPGPPPPPGAAG 378


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,374,238
Number of Sequences: 37544
Number of extensions: 421800
Number of successful extensions: 1220
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)